Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq12019 93.3 3e-14 >seq12019 Length=383594 Score = 93.3 bits (102), Expect = 3e-14 Identities = 149/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || ||||| |||||||||||||| ||| || ||| | || || || || Sbjct 132568 ATGCAGATCTTTGTTAAAACTCTTACTGGAAAAACCATAACATTAGAAGTTGAGCCCAGT 132509 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || | || | ||| |||||| |||||| ||||| || || |||| || | Sbjct 132508 GATACAATAGAAAAT--GTCAAAGCAAAAATCCAAGACAAGGAGGGCATTCCACCCGATC 132451 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 ||||| || | || ||||| || || || ||||| || | ||| | || || ||||| | Sbjct 132450 AGCAAAGGCTTATATTTGCTGGTAAGCAGTTGGAAGATGGACGTACATTATCTGATTATA 132391 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTT 27999 |||||||||||||| || |||||| | ||| Sbjct 132390 ACATCCAAAAAGAGTCAACATTGCATCTTGTT 132359 Score = 86.0 bits (94), Expect = 4e-12 Identities = 149/215 (69%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| |||||||||||||||||||| || ||| |||||| | || || || | Sbjct 131656 ATGCAGATTTTTGTGAAAACTCTTACAGGAAAAACGATTACATTAGAAGTTGAGCCTAGT 131597 Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| || | ||| || ||| |||||| || |||||||| | || || | Sbjct 131596 GACACCATCGAAAAT--GTAAAAGCAAAAATCCAAGATAAAGAAGGAATCCCTCCAGATC 131539 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| | | |||||||| || ||||| | || || | || | |||| || |||| Sbjct 131538 AGCAGAGACTTATTTTTGCTGGGAAACAGCTTGAAGATGGCCGTACTCTGTCTGACTACA 131479 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 |||| ||||||||| ||| | |||||||||||| Sbjct 131478 ACATTCAAAAAGAGTCTACTCTTCATTTGGTTTTG 131444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355564646927331