Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq12019 161 2e-34 >seq12019 Length=383594 Score = 161 bits (178), Expect = 2e-34 Identities = 169/221 (76%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 210900 CTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCA 210959 || ||||| | ||||||||||| || || || ||||||||||| | | ||| | ||| Sbjct 132810 CTGAGGACTAAATGAAGAGTGGATTCCTTCTGAATGTTATAATCAGACAAGGTTCGACCA 132869 Query 210960 TCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTG 211019 ||||| | ||||| ||||| || || || | |||||||||||||||| |||||||||| Sbjct 132870 TCTTCTAATTGCTTTCCTGCAAATATTAGCCTCTGTTGGTCAGGAGGAATTCCTTCCTTG 132929 Query 211020 TCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCGAGAGTG 211076 || |||||||| ||| || ||||| ||||| ||| ||| || ||||| | |||| Sbjct 132930 TCTTGGATCTTAGCTTTTACATTTTCAATGGTATCA---CTTGGCTCCACCTCCAAAGTG 132986 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || ||||| || || || || ||||| | ||||||||| Sbjct 132987 ATGGTTTTTCCAGTAAGTGTTTTCACAAAGATCTGCATTTT 133027 Score = 159 bits (176), Expect = 8e-34 Identities = 154/198 (78%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || ||| ||||| || ||||| || ||||| || || || || ||||||||||| | ||| Sbjct 125405 TCCACGGAGTCTCAGAACAAGATGCAGAGTAGATTCCTTCTGAATGTTATAATCAGAAAG 125464 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 ||| || |||||||| ||||||||||| || || ||||| ||||| || || ||||||| Sbjct 125465 GGTTCTGCCATCTTCAAGCTGCTTGCCAGCAAAAATAAGACGTTGCTGATCTGGAGGAAT 125524 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 |||||| || || ||||| ||| ||||| ||||| || |||||| ||| || || Sbjct 125525 TCCTTCTTTATCTTGGATTTTTGCCTTCACATTTTCTATTGTGTCACTTGGTTCCACTTC 125584 Query 211070 GAGAGTGATCGTCTTTCC 211087 ||||| |||||||| || Sbjct 125585 AAGAGTTATCGTCTTACC 125602 Score = 156 bits (172), Expect = 1e-32 Identities = 166/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 210896 AAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCT 210955 ||| |||||||| || ||||| || || |||||||| || ||||| || | ||| || | Sbjct 131666 AAGCCTTAGGACTAGATGAAGGGTAGATTCTTTTTGAATATTATAGTCTGAAAGAGTACG 131725 Query 210956 TCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTC 211015 |||||||| | || || || || |||||||| || || || ||||| |||| ||||| Sbjct 131726 ACCATCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGAATGCCTTC 131785 Query 211016 CTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGT 211075 || |||||||| ||| |||||||||||| ||||||||| | || ||||| | || Sbjct 131786 TTTATCCTGGATTTTTGCTTTCACGTTTTCAATGGTGTCACTGGGCTCTACCTCTAACGT 131845 Query 211076 GATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || || ||||| |||||||| | ||||| Sbjct 131846 AATGGTCTTGCCAGTAAGAGTTTTTACAAAAATTTGCAT 131884 Score = 156 bits (172), Expect = 1e-32 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| || || || |||||||| || |||||||| | || || | ||||||||||| ||| Sbjct 132593 GTGCAGGGTAGATTCTTTTTGAATATTATAATCTGAGAGTGTACGTCCATCTTCCAACTG 132652 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || || |||||||| || || || |||||||||| |||||| ||||| || || || Sbjct 132653 CTTTCCAGCAAAGATAAGTCGCTGCTGATCAGGAGGAATTCCTTCTTTGTCTTGAATTTT 132712 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 ||| || ||||| || || ||| | ||| ||||| | |||||| || ||||| || Sbjct 132713 AGCTTTTACATTTTCAATTGTATCACTGGGTTCTACCTCCAAAGTGATGGTTTTTCCAGT 132772 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 |||||||| ||||| | |||||| Sbjct 132773 CAGAGTCTTCACAAATATCTGCAT 132796 Score = 150 bits (166), Expect = 4e-31 Identities = 166/221 (75%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| ||||| ||||| || | || ||||||||||||||||||||||| | | || Sbjct 132348 CGAAGCCTTAGAACAAGATGCAATGTTGACTCTTTTTGGATGTTATAATCAGATAATGTA 132407 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||||||||||| |||||| || || || ||||| | ||| || || || |||| || Sbjct 132408 CGTCCATCTTCCAACTGCTTACCAGCAAATATAAGCCTTTGCTGATCGGGTGGAATGCCC 132467 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 |||||||| ||||| ||| ||| || ||||| || || ||| | ||||| || | Sbjct 132468 TCCTTGTCTTGGATTTTTGCTTTGACATTTTCTATTGTATCACTGGGCTCAACTTCTAAT 132527 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || ||||| || ||||| || ||||| | |||||| Sbjct 132528 GTTATGGTTTTTCCAGTAAGAGTTTTAACAAAGATCTGCAT 132568 Score = 136 bits (150), Expect = 9e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 |||||||| ||||||||||| ||||| || || | || || | |||||||| ||||| Sbjct 131454 TGAAGAGTAGACTCTTTTTGAATGTTGTAGTCAGACAGAGTACGGCCATCTTCAAGCTGT 131513 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || || || ||||| | || || || ||||| | |||||| || || ||||| ||| Sbjct 131514 TTCCCAGCAAAAATAAGTCTCTGCTGATCTGGAGGGATTCCTTCTTTATCTTGGATTTTT 131573 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 ||| || ||||||||||||||| ||||| || | || ||||| ||||| || Sbjct 131574 GCTTTTACATTTTCGATGGTGTCACTAGGCTCAACTTCTAATGTAATCGTTTTTCCTGTA 131633 Query 211092 AGAGTCTTTACAAACACCTGCAT 211114 ||||| || ||||| | |||||| Sbjct 131634 AGAGTTTTCACAAAAATCTGCAT 131656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158132390702345