Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq21104 143 6e-29 seq12019 141 2e-28 seq18485 138 3e-27 seq16325 111 4e-19 seq11355 109 1e-18 seq5776 109 1e-18 seq18740 98.7 2e-15 seq12807 96.9 8e-15 seq21344 93.3 1e-13 seq10376 93.3 1e-13 >seq21104 Length=2554 Score = 143 bits (158), Expect = 6e-29 Identities = 138/177 (78%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611 || || || || |||||| |||| || ||||| ||||| || ||||| ||| | ||||| Sbjct 938 CATCTATATAATGTTATTGTTACAGCACATGCATTTGTGATAATTTTTTTTATGGTTATA 879 Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671 || || |||| || || || ||||||||||| ||||||||||| | || ||||||||| Sbjct 878 CCAATTTTGATTGGTGGATTTGGAAATTGATTAGTTCCTTTAATATTAGGAGCTCCTGAT 819 Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTT 7728 ||||| ||||| | | || ||| ||||||||||||| |||| ||||| || ||| Sbjct 818 ATGGCATTTCCTCGAATGAATAATTTAAGTTTTTGATTGTTACCTCCTTCATTGTTT 762 Score = 86.0 bits (94), Expect = 1e-11 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 370673 TCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGAT 370732 || |||||||||||||| || |||||||||||| | | || ||||| ||||| || | Sbjct 367 TCTGGATGACCAAAAAACCAAAATAAATGTTGAAATAAAATTGGATCCCCTCCACCAGCA 426 Query 370733 GGATCAAAAAAGCTAGTATTAAAATTTCTATCAGT 370767 ||||||||||| ||||||||||| | |||||| Sbjct 427 GGATCAAAAAACGATGTATTAAAATTACGATCAGT 461 >seq12019 Length=383594 Score = 141 bits (156), Expect = 2e-28 Identities = 165/220 (75%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554 ||| || ||||| || || || || ||||||||||| | ||| || || | | ||| | Sbjct 131666 AAGCCTTAGGACTAGATGAAGGGTAGATTCTTTTTGAATATTATAGTCTGAAAGAGTACG 131725 Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614 |||||||||| || || ||||| |||||||| || || || || || ||||| ||||| Sbjct 131726 ACCATCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGAATGCCTTC 131785 Query 225615 CTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACG 225673 || || ||||| |||||| ||||| ||| |||||||| || || || ||||||| Sbjct 131786 TTTATCCTGGAT-TTTTGCTTTCACGTTTTCAATGGTGTCACTGGGCTCTACCTCTAACG 131844 Query 225674 TGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 | || |||||||| || | |||||||| || | |||||| Sbjct 131845 TAATGGTCTTGCCAGTAAGAGTTTTTACAAAAATTTGCAT 131884 Score = 123 bits (136), Expect = 6e-23 Identities = 150/202 (74%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| || | || ||||| || |||||||| | ||||| || | || ||| | || Sbjct 131441 TCTCAAAACCAAATGAAGAGTAGACTCTTTTTGAATGTTGTAGTCAGACAGAGTACGGCC 131500 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||| ||||| |||||||| || ||||||| || || || || || || ||||| || Sbjct 131501 ATCTTCAAGCTGTTTCCCAGCAAAAATAAGTCTCTGCTGATCTGGAGGGATTCCTTCTTT 131560 Query 225618 GTCTTGGATCTTTTGCTTC-ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGA 225676 |||||||| |||||||| ||| |||||||||||| | || || ||||| || | Sbjct 131561 ATCTTGGAT-TTTTGCTTTTACATTTTCGATGGTGTCACTAGGCTCAACTTCTAATGTAA 131619 Query 225677 TCGTCTTGCCCGTCAAAGTTTT 225698 |||| || || || | |||||| Sbjct 131620 TCGTTTTTCCTGTAAGAGTTTT 131641 Score = 123 bits (136), Expect = 6e-23 Identities = 153/207 (74%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| || || ||||| || | || || |||||||||| || ||||| | || || Sbjct 132348 CGAAGCCTTAGAACAAGATGCAATGTTGACTCTTTTTGGATGTTATAATCAGATAATGTA 132407 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | |||||||| | |||||| ||||| || ||||| | ||| || ||||| ||||| || Sbjct 132408 CGTCCATCTTCCAACTGCTTACCAGCAAATATAAGCCTTTGCTGATCGGGTGGAATGCCC 132467 Query 225613 TCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||||||||| |||||| || ||| ||| || || || || || || ||||| Sbjct 132468 TCCTTGTCTTGGAT-TTTTGCTTTGACATTTTCTATTGTATCACTGGGCTCAACTTCTAA 132526 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698 || || || || || || | |||||| Sbjct 132527 TGTTATGGTTTTTCCAGTAAGAGTTTT 132553 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 225499 CTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCA 225558 || ||||| | || ||||||||||| || || | || ||||| | ||| |||| ||| Sbjct 132810 CTGAGGACTAAATGAAGAGTGGATTCCTTCTGAATGTTATAATCAGACAAGGTTCGACCA 132869 Query 225559 TCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTG 225618 ||||||| ||||| || || || || || | |||||||| || ||||| ||||||||| Sbjct 132870 TCTTCTAATTGCTTTCCTGCAAATATTAGCCTCTGTTGGTCAGGAGGAATTCCTTCCTTG 132929 Query 225619 TCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATC 225678 ||||||||||| || ||| ||| ||||| || | ||||| || || ||||| Sbjct 132930 TCTTGGATCTTAGCTTTTACATTTTCAATGGTATCACTTGGCTCCACCTCCAAAGTGATG 132989 Query 225679 GTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || || || || | ||||| | || | |||||||| Sbjct 132990 GTTTTTCCAGTAAGTGTTTTCACAAAGATCTGCATTTT 133027 Score = 120 bits (132), Expect = 7e-22 Identities = 151/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554 ||||| || || | ||| || || ||||||||||| | ||| ||||| | | || | Sbjct 132578 AAGTCGCAAAACTAAGTGCAGGGTAGATTCTTTTTGAATATTATAATCTGAGAGTGTACG 132637 Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614 |||||||| | |||||| ||||| ||||||||||| || || || || ||||| ||||| Sbjct 132638 TCCATCTTCCAACTGCTTTCCAGCAAAGATAAGTCGCTGCTGATCAGGAGGAATTCCTTC 132697 Query 225615 CTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACG 225673 |||||||| || ||| || || ||| ||| || || || || ||| || || || | Sbjct 132698 TTTGTCTTGAAT-TTTAGCTTTTACATTTTCAATTGTATCACTGGGTTCTACCTCCAAAG 132756 Query 225674 TGATCGTCTTGCCCGTCAAAGTTTT 225698 |||| || || || |||| ||| || Sbjct 132757 TGATGGTTTTTCCAGTCAGAGTCTT 132781 Score = 116 bits (128), Expect = 9e-21 Identities = 148/201 (74%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 225499 CTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCA 225558 || || || | ||| ||||| |||||||| || | |||||| || | ||||| | ||| Sbjct 131898 CTTAGTACCAAGTGCAGAGTCGATTCTTTCTGAATATTGTAGTCCGATAAAGTACGTCCA 131957 Query 225559 TCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTG 225618 || |||| ||||||||| || || ||||| | |||||| || || ||||||||||| || Sbjct 131958 TCCTCTAACTGCTTCCCTGCAAATATAAGCCTTTGTTGATCAGGAGGAATACCTTCTTTA 132017 Query 225619 TCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 || ||||| ||| || || ||| ||| || || || | || || ||||| ||||| Sbjct 132018 TCCTGGAT-TTTAGCTTTAACATTTTCTATTGTATCACTAGGCTCAACTTCTAAAGTGAT 132076 Query 225678 CGTCTTGCCCGTCAAAGTTTT 225698 || || || || | |||||| Sbjct 132077 AGTTTTACCAGTAAGAGTTTT 132097 Score = 96.9 bits (106), Expect = 8e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 || |||| ||||| || | || || || ||||| | ||| || || | || ||||| Sbjct 131137 AGCCTCAAAACAAGATGTAATGTTGACTCCTTTTGAATATTATAGTCTGATAATGTTCTG 131196 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 ||||||||||||||||| ||||| || || | | || || || || ||||||||||| Sbjct 131197 CCATCTTCTAGCTGCTTACCAGCAAAAATCAACCTCTGCTGATCTGGTGGAATACCTTCT 131256 Query 225616 TTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674 || ||||| || |||||| || ||| ||| || || || || || || || ||||| Sbjct 131257 TTATCTTGTAT-TTTTGCTTTAACATTTTCAATAGTATCACTGGGCTCGACTTCCAACGT 131315 Query 225675 GATCGTCTTGCC 225686 || || || || Sbjct 131316 TATAGTTTTACC 131327 >seq18485 Length=493292 Score = 138 bits (152), Expect = 3e-27 Identities = 133/171 (78%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 7558 TACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTT 7617 || || |||||| |||| || ||||| ||||| || ||||| ||| | ||||| || || Sbjct 487967 TATAATGTTATTGTTACAGCACATGCATTTGTAATAATTTTTTTTATGGTTATACCAATT 488026 Query 7618 ATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCT 7677 |||| || || || ||||||||||| |||||||| || | || ||||||||||| || Sbjct 488027 TTGATTGGTGGATTTGGAAATTGATTAGTTCCTTTGATATTAGGAGCTCCTGATATAGCA 488086 Query 7678 TTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTT 7728 || || | | || ||| |||||||||||||| |||| ||||| |||||| Sbjct 488087 TTCCCTCGAATAAATAATTTAAGTTTTTGATTATTACCTCCTTCATTATTT 488137 Score = 91.5 bits (100), Expect = 4e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 370673 TCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGAT 370732 || ||||||||||||||||| |||||||||||| | | || ||||| ||||| || | Sbjct 488532 TCTGGATGACCAAAAAATCAAAATAAATGTTGAAATAAAATTGGATCCCCTCCTCCAGCA 488473 Query 370733 GGATCAAAAAAGCTAGTATTAAAATTTCTATCAGT 370767 ||||||||||| ||||||||||| | |||||| Sbjct 488472 GGATCAAAAAACGATGTATTAAAATTACGATCAGT 488438 >seq16325 Length=160397 Score = 111 bits (122), Expect = 4e-19 Identities = 84/99 (85%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 ||||||||||||||||||||| |||||||||||| | | |||||||| ||||| || | Sbjct 106840 TTCAGGATGACCAAAAAATCAAAATAAATGTTGAAATAAAATAGGATCTCCTCCTCCAGC 106781 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 ||||||||||| ||||||||||||| ||||||||| Sbjct 106780 AGGATCAAAAAATGATGTATTAAAATTTCGATCAGTTAA 106742 Score = 95.1 bits (104), Expect = 3e-14 Identities = 108/144 (75%), Gaps = 1/144 (1%) Strand=Plus/Plus Query 7585 TTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGGCGGTTTCGGAAATTGATTC 7644 ||||| || ||||| ||| | || || || || |||| || || || |||||||| || Sbjct 106303 TTTGTAATAATTTT-TTTATAGTAATACCAATTTTGATTGGAGGATTTGGAAATTGGTTG 106361 Query 7645 GTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAGGCTTAACAATATAAGTTTT 7704 || ||||||| | || ||||||||||| || ||||| | | || ||| | || ||| Sbjct 106362 GTATTTTTAATGTTAGGAGCTCCTGATATAGCGTTTCCTCGAATAAATAATTTGAGATTT 106421 Query 7705 TGATTACTACCGCCTTCCTTATTT 7728 |||||| |||| ||||| |||||| Sbjct 106422 TGATTATTACCTCCTTCATTATTT 106445 >seq11355 Length=693775 Score = 109 bits (120), Expect = 1e-18 Identities = 127/170 (75%), Gaps = 5/170 (3%) Strand=Plus/Plus Query 7558 TACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTT 7617 || || || ||| |||| || |||| ||||| || ||||| ||| | ||||| || || Sbjct 405418 TATAATGTAATTGTTACTGCTCATGTTTTTGTAATAATTTTTTTTATAGTTATACCAATT 405477 Query 7618 ATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCT 7677 |||| || || || ||||||||||| || |||||||| | || ||||||||||| | Sbjct 405478 TTGATTGGAGGATTTGGAAATTGATTAGTGCCTTTAATATTGGGAGCTCCTGATAT-ACA 405536 Query 7678 TTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATT 7727 ||||| | | || ||| |||||||||||||| | ||||| ||||| Sbjct 405537 TTTCCTCGAATAAATAATTTAAGTTTTTGATTATT----CCTTCATTATT 405582 Score = 87.8 bits (96), Expect = 4e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 370673 TCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGAT 370732 || |||||||||||||| || | |||||||||| | |||||||| ||||| || | | Sbjct 405977 TCTGGATGACCAAAAAACCAAAGTAAATGTTGAAATCAAATAGGATCTCCTCCCCCAGCT 405918 Query 370733 GGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 ||||||||||| ||||||||||||| ||| |||| Sbjct 405917 GGATCAAAAAATGATGTATTAAAATTTCGATCCATTAA 405880 >seq5776 Length=2473685 Score = 109 bits (120), Expect = 1e-18 Identities = 113/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 7558 TACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTT 7617 || || |||||| |||| || ||||| ||||| || ||||| ||| | ||||| || || Sbjct 882957 TATAATGTTATTGTTACAGCACATGCATTTGTAATAATTTTTTTTATGGTTATACCAATT 882898 Query 7618 ATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCT 7677 |||| || || || ||||||||||| ||||||||||| | || ||||||||||| || Sbjct 882897 TTGATTGGTGGATTTGGAAATTGATTAGTTCCTTTAATATTAGGAGCTCCTGATATAGCA 882838 Query 7678 TTTCCAAGGCTTAACAATATAAGTTTTT 7705 || || | | || ||| | ||||||| Sbjct 882837 TTCCCTCGAATAAATAATTTTAGTTTTT 882810 >seq18740 Length=1201418 Score = 98.7 bits (108), Expect = 2e-15 Identities = 83/102 (81%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| ||||| |||||||||||||| || ||||| || || ||||| || || |||||||| Sbjct 62023 GAAAATTTGTCCATCAGTAATAGAAATTACATTAGTTGGAATATATGCGGACACATCACC 61964 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACC 4571 || |||||||| | ||||||||||| || || || ||||| Sbjct 61963 AGCCTGTGTTTCAATGACAGGTAAGGCAGTAAGAGAACCACC 61922 >seq12807 Length=718646 Score = 96.9 bits (106), Expect = 8e-15 Identities = 80/98 (82%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 370673 TCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGAT 370732 |||||||||||||||||||| |||||||| ||| | | |||| ||| ||||| || | Sbjct 597412 TCAGGATGACCAAAAAATCAAAATAAATGCTGAAATAAAATAGAATCTCCTCCTCCAGCA 597353 Query 370733 GGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 ||||||||||| ||||||||||||| | ||||||| Sbjct 597352 GGATCAAAAAATGATGTATTAAAATTTCGACCAGTTAA 597315 >seq21344 Length=233869 Score = 93.3 bits (102), Expect = 1e-13 Identities = 125/172 (73%), Gaps = 3/172 (2%) Strand=Plus/Plus Query 7561 AACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATG 7620 || || ||||||| || ||| ||||| |||||| | ||| | |||||||| || || Sbjct 178142 AATGTAATTATTATTGCTTGTGCTTTTGTAATGATTGTTTTTATAGTTATGCCTATTTTG 178201 Query 7621 ATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTT 7680 || | || || |||||||| || ||||||||||| | || | ||| ||||||| || Sbjct 178202 ATTCGTGGGTTTGGAAATTGGTTAGTTCCTTTAATATTAGGGACGCCTAATATGGC--TT 178259 Query 7681 CCA-AGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTA 7731 ||| | | || ||| ||||||||| ||| ||| |||| |||||| || Sbjct 178260 CCAGTGAATAAATAATTTAAGTTTTTAGTTATTACTTCCTTTATTATTTTTA 178311 >seq10376 Length=69093 Score = 93.3 bits (102), Expect = 1e-13 Identities = 83/103 (81%), Gaps = 1/103 (1%) Strand=Plus/Plus Query 370673 TCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGAT 370732 ||||||||||||| |||||| |||||||| ||| | | || | ||| ||||| || | Sbjct 19195 TCAGGATGACCAACAAATCAAAATAAATGCTGAAATAAAATTGCATCTCCTCCTCCAGCA 19254 Query 370733 GGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA-AACA 370774 ||||||||||| ||||||||||||| ||||||||| |||| Sbjct 19255 GGATCAAAAAATGATGTATTAAAATTTCGATCAGTTAATAACA 19297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1191482229805182