Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq3821 152 4e-32 >seq3821 Length=102291 Score = 152 bits (168), Expect = 4e-32 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 4931 TACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATAT 4990 ||| || ||||| || || || || ||||| ||||||||||| || |||| || || || Sbjct 84872 TACCAAATTTTCATTCACAATGCCATCACTCGCTGCAAAAAATGCTAAAATGTGTGAAAT 84931 Query 4991 AAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAAC 5050 ||||| || ||| || ||||| | |||| ||| | | |||||| | ||| ||||| Sbjct 84932 AAAGTGCTTTTCTTCGGGCTTTAACTTTTCCCAATCTCCTAGATCTTTTGATAAGTCAAC 84991 Query 5051 TTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATCAGGATA 5110 ||||||| ||||||| ||||| ||||| || ||||| ||||| ||| ||||| |||| Sbjct 84992 TTCTTCAGCAGTCCAGAACGAAGCTTCAGCCTTTTTATACATCTGCCATATATCTTGATA 85051 Query 5111 CTGAATCGGAAGTATGACAAATCT 5134 || ||| |||| ||| |||||||| Sbjct 85052 CTCAATGGGAAATATTACAAATCT 85075 Score = 134 bits (148), Expect = 1e-26 Identities = 173/235 (74%), Gaps = 3/235 (1%) Strand=Plus/Plus Query 4562 ATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACC 4621 ||||| |||| | |||| || |||| ||| || ||| || | || ||||||||||| Sbjct 78305 ATGCATACCT-CATCTCGACTTATCAATTCATTGCTAAATGTAAGGCCAGGCATTAAACC 78363 Query 4622 TCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGC 4681 |||||| || ||||| ||||| | |||||||| |||||||||||||| |||||||| || Sbjct 78364 TCTCTTCTTCAGCCAGAATATGGATGCAAATGAACCAGAAAAGAATATTCCTTCTACAGC 78423 Query 4682 GGCAAACGCTACTAATCGGGACCCGAACGA-GCTGGCTTTGTCTTTAATCCATTTTAATG 4740 ||||| || || | ||| || || || || || | | |||||||| || || | Sbjct 78424 AGCAAATGCAACGATTCGTTCACCAAAGGATGCATGC-GTATGATTAATCCAATTCAAAG 78482 Query 4741 CCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAATTT 4795 |||| | |||||| ||||| || || | || || | ||||| || ||||| || Sbjct 78483 CCCAATCAGCTTTCTTCTTCACACAGGAAAGAGTTTCAATAGCATTGAATAACTT 78537 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 4353 TTTTCACACTTTAGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATG 4412 |||||||| ||| | || || | || ||||||||||||||| || ||||| |||| Sbjct 77737 TTTTCACATCCTAGTTCCACTAGAAGTCTGTCAGCTACAAATTCAATGTACTGTTTCATC 77796 Query 4413 AGTTCGCAGTTAATTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCT 4472 | | ||| ||||| ||||| ||||| | || | ||| | ||| |||||||| Sbjct 77797 AACTTATTGTTCATTCCTATTAAAGCAACAGGCAATGCTTCTGTGAGAAATTCTTGTTCA 77856 Query 4473 ATAGTTACGGCTTCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAG 4532 |||| |||||| || | || || | | | | | | || |||||||||||||| | Sbjct 77857 ATAGATACGGCATCAGATATAATTTGGGTAACTCTTTTTTCTGATGGTTTATTTACAAGA 77916 Query 4533 TATCCAAACAATAAACACGCAAAATCACAATGCAAACC 4570 | | |||| || || ||||||||||||||||| || Sbjct 77917 TGACTGAACATTAGGCAGGCAAAATCACAATGCAAGCC 77954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426692283996449