Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq3821 149 9e-31 seq15467 109 8e-19 >seq3821 Length=102291 Score = 149 bits (164), Expect = 9e-31 Identities = 154/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 47013 CAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAA 47072 |||||| |||||||| || |||||||| || ||||||||||| || | ||| |||||| Sbjct 84875 CAAATTTTCATTCACAATGCCATCACTCGCTGCAAAAAATGCTAAAATGTGTGAAATAAA 84934 Query 47073 ATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTC 47132 | ||||| |||| | | || | ||| || | ||||||||||| || ||||| Sbjct 84935 GTGCTTTTCTTCGGGCTTTAACTTTTCCCAATCTCCTAGATCTTTTGATAAGTCAACTTC 84994 Query 47133 TTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTG 47192 |||||| |||||||| || || || || ||||||||||| | ||||||||| |||| | Sbjct 84995 TTCAGCAGTCCAGAACGAAGCTTCAGCCTTTTTATACATCTGCCATATATCTTGATACTC 85054 Query 47193 GATCGGAAAAATAACAAATCTA 47214 || ||||| || ||||||||| Sbjct 85055 AATGGGAAATATTACAAATCTA 85076 Score = 131 bits (144), Expect = 2e-25 Identities = 160/218 (73%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713 ||||||| ||| || ||||| || |||||| || |||||||||| || | ||| || Sbjct 78314 TCATCTCGACTTATCAATTCATTGCTAAATGTAAGGCCAGGCATTAAACCTCTCTTCTTC 78373 Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773 ||||| ||||| | || || || |||||||||||||| ||||||||||| || ||||| Sbjct 78374 AGCCAGAATATGGATGCAAATGAACCAGAAAAGAATATTCCTTCTACAGCAGCAAATGCA 78433 Query 46774 ACAAGTCTCTCTCCGTAACTGGCAT---CATTATGAATCCACCTTTGAGCCCAATCAGCC 46830 || | || || || | |||| || || |||||| | |||||||||||| Sbjct 78434 ACGATTCGTTCACCAAAGGATGCATGCGTATGATTAATCCAATTCAAAGCCCAATCAGCT 78493 Query 46831 TTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAA 46868 || ||||| ||||| | | ||||| |||||||| || Sbjct 78494 TTCTTCTTCACACAGGAAAGAGTTTCAATAGCATTGAA 78531 Score = 91.5 bits (100), Expect = 2e-13 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 46889 TATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAG 46948 ||||||||| || ||||| || | | ||| |||||||||||||| | |||||||| | Sbjct 82884 TATCTTTAATGTAAGTATCAATAAGCAAACTGTACATTTCTGAATGGACATTTTCAATTG 82943 Query 46949 CCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTT 47008 | ||||| || || || ||||| | |||||||||| ||| || ||| || |||| || Sbjct 82944 CTATCTGGAAACCATAGAAACAGCGGGCTTCAGTAACCTGCACTTCTTGACTGAATCTTT 83003 Query 47009 CANNCAAAT 47017 || | ||| Sbjct 83004 CAACCTAAT 83012 Score = 89.7 bits (98), Expect = 7e-13 Identities = 159/231 (69%), Gaps = 1/231 (0%) Strand=Plus/Plus Query 46427 TATAAAtttttttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATACG 46486 || ||| |||| | |||||| ||| | ||||| || || || ||||| || ||| Sbjct 77729 TACAAACCTTTTCACATCCTAGTTCCACTAGAAGTCTGTCAGCTACAAATTCAATGTACT 77788 Query 46487 TTTTCATCATTTCACAATTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACT 46546 |||||||| | | ||||||||||| | || || | || || || ||||| | Sbjct 77789 GTTTCATCAACTTATTGTTCATTCCTATTAAAGCAACAGGCAATGCTTCTGTGAGAAATT 77848 Query 46547 CTTGTTCAATAGTGACAGCATCCGATATTATCGATGTTACTGTTTCCTCACTTGGTGGAT 46606 |||||||||||| || ||||| ||||| || || ||| ||| || |||| || Sbjct 77849 CTTGTTCAATAGATACGGCATCAGATATAATTTGGGTAACTCTTTTTTCTGATGGTTTAT 77908 Query 46607 GCATCAAATGTTTAAACATTAAACATGCAAAATCACAATG-AAGGCCTTCA 46656 | | ||| | ||||||| || |||||||||||||| ||| ||| || Sbjct 77909 TTACAAGATGACTGAACATTAGGCAGGCAAAATCACAATGCAAGCCCTACA 77959 Score = 86.0 bits (94), Expect = 9e-12 Identities = 111/153 (73%), Gaps = 3/153 (2%) Strand=Plus/Plus Query 46284 TTAAAAGTCGACATCTAAAGAAAAATGATTATCTTCTTGT---GACATAACTCCCATTTT 46340 |||||| || ||||||| | ||| | | ||| || | | ||||| ||||| || Sbjct 76391 TTAAAAATCTGCATCTAATGTGAAACGGTGATCCTCCTTTTTAGACATGACTCCACACTT 76450 Query 46341 TTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 46400 ||| ||||| || || |||||| ||||| || ||||| ||||| || |||| || Sbjct 76451 TTGATATTCTCCGACTTTTTTCTCAAAAAAGTTTGTTTTCCCTTCTAAGCTAATATGCTC 76510 Query 46401 CATAAAATCAAACGGATTAGTAACATTATAAAt 46433 |||||||||||| ||||| ||||||||| || Sbjct 76511 CATAAAATCAAATGGATTTTCAACATTATATAT 76543 >seq15467 Length=153806 Score = 109 bits (120), Expect = 8e-19 Identities = 126/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 75445 CCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATT 75504 |||||| || || ||||||||||||| ||| |||| | || || || || |||| ||| Sbjct 55141 CCATCCATAAAAGTGCATGCTTGTTAATTTTCCATAATTTGGTTCAGCAATGTGAACATT 55200 Query 75505 CATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTT 75564 | |||||||||||||| || |||| ||||||||||| |||||||||| || | || Sbjct 55201 TAGAGACTGACTTTGATCTATATAAGCACCTCTATCAGCAGCCATTTTTAAGATATTTTT 55260 Query 75565 TTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 75614 || || || ||||||| || | | || |||| |||||| |||| Sbjct 55261 CTGCGGTATCTCCCAAACTGTACGATATAATTTCTTGAGATCATCAGGAA 55310 Score = 105 bits (116), Expect = 1e-17 Identities = 103/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781 |||||||| ||||| || || || | ||| || | |||||| || ||||| || | |||| Sbjct 63804 TGAAATTCCCCAGATAAAACCCTCCTAGTATAGAAATTACTAGTGTATGGCTCTATAGAT 63863 Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841 ||||| ||||| | |||||| ||||||||||| || |||||||| || || | ||||| Sbjct 63864 TCATTATTTCCAAGAATTTGCGCAGTTGAAGCTGTTGGCATAGGGGCTACAAGCAAACTG 63923 Query 75842 TTTCTGAGACCAT 75854 || || | |||| Sbjct 63924 TTCCTTACTCCAT 63936 Score = 95.1 bits (104), Expect = 2e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 76519 TTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGA 76578 ||||||||| || ||||| |||| | || || ||||||| |||||||| || Sbjct 76873 TTCAAATTCCTCCCCCCAGCATTCATGAAGTCCTGGTGATTCATTTGGACACATTAAACT 76932 Query 76579 CCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAA 76638 |||| | || | | || ||||||||||| | ||| || ||||| | ||| ||| Sbjct 76933 CCACATTTCGTCCTTTTCTACTCGTTTCATAAATAAATCTGGAATCCACAATGCATAAAA 76992 Query 76639 TAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCAT 76698 ||||||| || || | ||||| || || |||||||| || | ||||| || || | Sbjct 76993 CAGATCTCTGGCCCTCTGCTCTTCTTTGCCAGTATTCTTCTTTAAATCTAAAAAGTCAAA 77052 Query 76699 AATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTC 76745 || || | |||||| || |||| ||| || || | | | || |||| Sbjct 77053 TATGTCTGCATGCCAAGGCTCTAAATAAATTGCAAAAGCTCCAGGTC 77099 Score = 95.1 bits (104), Expect = 2e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 76993 AGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATT 77052 |||||| | ||| || | || |||||||||||||| ||||| |||||||| | || || Sbjct 107176 AGTTCCAGAATTGAAGAGGGTTGGAGATGCATGAGTAAACCACTTTTCAGACAATAAATG 107235 Query 77053 GTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAA 77112 ||||| |||||| |||| || || || ||| || || ||||| || ||||| | Sbjct 107236 ATATGTCTCAATAGCTGCATCAATGTCATCACCATGTATACCAACAGCAACTCGCATAAG 107295 Query 77113 CATATGCTGAGGTCGTTCTACA 77134 |||||| || ||||| || ||| Sbjct 107296 CATATGTTGCGGTCGCTCAACA 107317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712322586432960