Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq12019 143 6e-29 >seq12019 Length=383594 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||||||||||||||||||||| |||||||| || | | ||| | |||||||| || Sbjct 131453 ATGAAGAGTAGACTCTTTTTGAATGTTGTAGTCAGACAGAGTACGGCCATCTTCAAGCTG 131512 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 |||||| || || ||||| |||||||| || | | ||||||||| || ||||| ||||| Sbjct 131513 TTTCCCAGCAAAAATAAGTCTCTGCTGATCTGGAGGGATTCCTTCTTTATCTTGGATTTT 131572 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 | ||| ||| | || | | |||| | ||| ||||| | ||||| ||||| || || Sbjct 131573 TGCTTTTACATTTTCGATGGTGTCACTAGGCTCAACTTCTAATGTAATCGTTTTTCCTGT 131632 Query 152081 GAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| || | |||||| Sbjct 131633 AAGAGTTTTCACAAAAATCTGCAT 131656 Score = 118 bits (130), Expect = 2e-21 Identities = 162/223 (73%), Gaps = 10/223 (4%) Strand=Plus/Plus Query 151890 CTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCA 151949 |||||||| | ||||||||| || || || || ||||| ||||| | || |||| ||| Sbjct 132810 CTGAGGACTAAATGAAGAGTGGATTCCTTCTGAATGTTATAATCAGACAAGGTTCGACCA 132869 Query 151950 TCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCT 152007 ||||||| ||||| || || || || |||||||| ||||| | | |||||||||| Sbjct 132870 TCTTCTAATTGCTTT--CCTGCAAATATTAGCCTCTGTTGGTCAGGAGGAATTCCTTCCT 132927 Query 152008 TTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAG 152064 | ||||| || || ||| ||| | || | | | || ||| ||| || || | || Sbjct 132928 TGTCTTGGATCTTAGCTTTTACATTTTCAATGGTATC---ACTTGGCTCCACCTCCAAAG 132984 Query 152065 TAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | || ||||| || || || || ||||| |||| ||||||||| Sbjct 132985 TGATGGTTTTTCCAGTAAGTGTTTTCACAAAGATCTGCATTTT 133027 Score = 116 bits (128), Expect = 9e-21 Identities = 160/221 (72%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 || || || |||||||| | || ||||||||||||||||| ||||| | ||| || | Sbjct 132351 AGCCTTAGAACAAGATGCAATGTTGACTCTTTTTGGATGTTATAATCAGATAATGTACGT 132410 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||||| | || || || || |||||||| ||||| || | | || || ||| Sbjct 132411 CCATCTTCCAACTGCTTACCAGCAAATATAAGCCTTTGCTGATCGGGTGGAATGCCCTCC 132470 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGA 152063 || ||||| |||||| ||||||| | |||| ||| | ||| ||| ||||| | Sbjct 132471 TTGTCTTGGATTTTTGCTTTGACATTTTCTA--TTGTAT-CACTGGGCTCAACTTCTAAT 132527 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || || ||||| || || |||| |||||| Sbjct 132528 GTTATGGTTTTTCCAGTAAGAGTTTTAACAAAGATCTGCAT 132568 Score = 96.9 bits (106), Expect = 8e-15 Identities = 139/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 |||||| || |||||||| |||||||| || || || ||||| ||||| | | ||||| Sbjct 125411 GAGTCTCAGAACAAGATGCAGAGTAGATTCCTTCTGAATGTTATAATCAGAAAGGGTTCT 125470 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||| || || || || || ||||| | ||||| || | | |||||||| Sbjct 125471 GCCATCTTCAAGCTGCTTGCCAGCAAAAATAAGACGTTGCTGATCTGGAGGAATTCCTTC 125530 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTC---TCTACTTCAAG 152062 || ||||| |||||| || ||| | |||| |||| ||| || |||||||| Sbjct 125531 TTTATCTTGGATTTTTGCCTTCACATTTTCTATTGTGTC---ACTTGGTTCCACTTCAAG 125587 Query 152063 AGTAATAGTTTTGCC 152077 ||| || || || || Sbjct 125588 AGTTATCGTCTTACC 125602 Score = 91.5 bits (100), Expect = 3e-13 Identities = 148/208 (71%), Gaps = 10/208 (5%) Strand=Plus/Plus Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GC 151959 || || ||||| |||||||| || || ||||| | | || | |||||||| | || Sbjct 132594 TGCAGGGTAGATTCTTTTTGAATATTATAATCTGAGAGTGTACGTCCATCTTCCAACTGC 132653 Query 151960 TTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTT 152019 ||| || || |||||||| | |||||| || | | |||||||| || |||||||||| Sbjct 132654 TTT--CCAGCAAAGATAAGTCGCTGCTGATCAGGAGGAATTCCTTCTTTGTCTTGAATTT 132711 Query 152020 TTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATAGTTTTGC 152076 | ||| ||| | || | ||| | ||| ||||| || | ||| || ||||| | Sbjct 132712 TAGCTTTTACATTTTCAA--TTGTAT-CACTGGGTTCTACCTCCAAAGTGATGGTTTTTC 132768 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || ||||||||||| || | |||||| Sbjct 132769 CAGTCAGAGTCTTCACAAATATCTGCAT 132796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1152805880114163