Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq12019 163 7e-35 >seq12019 Length=383594 Score = 163 bits (180), Expect = 7e-35 Identities = 170/221 (77%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || ||||| ||||||||||| |||||||||||||| || | || || || || || Sbjct 131653 CAGATTTTTGTGAAAACTCTTACAGGAAAAACGATTACATTAGAAGTTGA--GCCTAGTG 131596 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 |||||||||| || || ||| ||| || || || ||||||||||||||||| || |||| Sbjct 131595 ACACCATCGAAAATGTAAAAGCAAAAATCCAAGATAAAGAAGGAATCCCTCCAGATCAGC 131536 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | ||||||| || || || |||||||| |||||||| | ||||| | || || ||| Sbjct 131535 AGAGACTTATTTTTGCTGGGAAACAGCTTGAAGATGGCCGTACTCTGTCTGACTACAACA 131476 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 | |||||||| || || || ||| | ||||||||| | ||| Sbjct 131475 TTCAAAAAGAGTCTACTCTTCATTTGGTTTTGAGATTAAGA 131435 Score = 161 bits (178), Expect = 2e-34 Identities = 167/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| ||||| || |||||||| ||||| | ||||| ||| | || Sbjct 132793 CAGATATTTGTGAAGACTCTGACTGGAAAAACCATCACTTTGGAGGTAGAACCCAGTGAT 132734 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| || ||||| |||||||||||||| ||||| || ||||| Sbjct 132733 ACAATTGAAAATGTAAAAGCTAAAATTCAAGACAAAGAAGGAATTCCTCCTGATCAGCAG 132674 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||||||||| || ||||| ||| | ||||||||| | || || | |||||||| | Sbjct 132673 CGACTTATCTTTGCTGGAAAGCAGTTGGAAGATGGACGTACACTCTCAGATTATAATATT 132614 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||||||||| || ||||| | |||||| |||| ||| Sbjct 132613 CAAAAAGAATCTACCCTGCACTTAGTTTTGCGACTTAGA 132575 Score = 143 bits (158), Expect = 6e-29 Identities = 148/194 (76%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 177946 CAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAA 178005 |||| || ||||| || || || |||||| ||||| || || || || || || Sbjct 125604 CAGGTAAGACGATAACTCTTGAAGTGGAACCAAGTGACACAATAGAAAATGTGAAGGCAA 125545 Query 178006 AGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAAC 178065 | || || || ||||||||||| ||||| || |||||||| ||||| || || || || | Sbjct 125544 AAATCCAAGATAAAGAAGGAATTCCTCCAGATCAGCAACGTCTTATTTTTGCTGGCAAGC 125485 Query 178066 AGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATC 178125 |||| |||||||| || || ||| | ||||||||| | || || ||||| || ||||||| Sbjct 125484 AGCTTGAAGATGGCAGAACCCTTTCTGATTATAACATTCAGAAGGAATCTACTCTGCATC 125425 Query 178126 TTGTTTTGAGACTC 178139 ||||| |||||||| Sbjct 125424 TTGTTCTGAGACTC 125411 Score = 140 bits (154), Expect = 8e-28 Identities = 157/208 (75%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 |||||||| || |||||||| || || || || || || | ||||| || || ||| Sbjct 131881 CAAATTTTTGTAAAAACTCTTACTGGCAAGACCATTACGTTAGAGGTAGA--GCCCAGTG 131824 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| || ||||| ||| ||| || ||||| |||||||| || || || || |||| Sbjct 131823 ACACCATTGAAAACGTGAAAGCAAAAATCCAGGATAAAGAAGGCATTCCACCTGATCAGC 131764 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || |||||||| || || ||||| | |||||||| | |||||| | || ||||| Sbjct 131763 AGCGTCTTATCTTTGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCAGACTATAATA 131704 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129 | ||||||||||| || || ||||| || Sbjct 131703 TTCAAAAAGAATCTACCCTTCATCTAGT 131676 Score = 129 bits (142), Expect = 1e-24 Identities = 160/217 (74%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || || |||||||| || |||||||| || || | || || || || ||| Sbjct 132565 CAGATCTTTGTTAAAACTCTTACTGGAAAAACCATAACATTAGAAGTTGA--GCCCAGTG 132508 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 | || || || || |||||| ||| || || ||||| || || || || || || |||| Sbjct 132507 ATACAATAGAAAATGTCAAAGCAAAAATCCAAGACAAGGAGGGCATTCCACCCGATCAGC 132448 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 || | ||||| || || || || ||| | ||||||||| | || | | ||||||||| Sbjct 132447 AAAGGCTTATATTTGCTGGTAAGCAGTTGGAAGATGGACGTACATTATCTGATTATAACA 132388 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 |||||||||| |||||| ||||||||||| | || || Sbjct 132387 TCCAAAAAGAGTCAACATTGCATCTTGTTCTAAGGCT 132351 Score = 93.3 bits (102), Expect = 1e-13 Identities = 141/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 177946 CAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG--ACACCATCGAGAACGTCAAACA 178003 |||| ||||| || || | || || || || ||| | || || || || || ||| Sbjct 131329 CAGGTAAAACTATAACGTTGGAAGTCGA--GCCCAGTGATACTATTGAAAATGTTAAAGC 131272 Query 178004 AAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAA 178063 ||| || || || |||||||| || || || || ||||| | | || || || || || Sbjct 131271 AAAAATACAAGATAAAGAAGGTATTCCACCAGATCAGCAGAGGTTGATTTTTGCTGGTAA 131212 Query 178064 ACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCA 178123 ||||| |||||||| || || | | || ||||| | ||||| || |||||| | || Sbjct 131211 GCAGCTAGAAGATGGCAGAACATTATCAGACTATAATATTCAAAAGGAGTCAACATTACA 131152 Query 178124 TCTTGTTTTGAGACTCAGA 178142 |||||||||||| || ||| Sbjct 131151 TCTTGTTTTGAGGCTGAGA 131133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202672378099682