Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq12019 84.2 2e-11 >seq12019 Length=383594 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/208 (70%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 41659 ATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTG 41718 ||| || ||| ||||||||||||||||| || || | ||| || | || || | || Sbjct 132821 ATGAAGAGTGGATTCCTTCTGAATGTTATAATCAGACAAGGTTCGACCATCTTCTAATTG 132880 Query 41719 CTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTT 41778 ||| || || ||||| || | ||||||||| | |||| | ||||||| | || | | Sbjct 132881 CTTTCCTGCAAATATTAGCCTCTGTTGGTCAGGAGGAATTCCTTCCTTGT-CTTGGATCT 132939 Query 41779 TTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCG 41837 | |||| || | | || || || | ||||||||||| || || ||||| || | Sbjct 132940 TAGCTTTTACATTTTCAATGGTATCACTTGGCTCCACCTCCAAAGTGATGGTTTTTCCAG 132999 Query 41838 TCAGCGTCTTTACGAAAATCTGCATGTT 41865 | || || || || || |||||||| || Sbjct 133000 TAAGTGTTTTCACAAAGATCTGCATTTT 133027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461907268043600