Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31] 12,042 sequences; 971,188,624 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq305 156 4e-33 >seq305 Length=710094 Score = 156 bits (172), Expect = 4e-33 Identities = 458/694 (66%), Gaps = 14/694 (2%) Strand=Plus/Plus Query 16798 ATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTAC 16857 ||| ||||||||||| ||||| | | ||||||| || || ||||| || || | | Sbjct 408382 ATCTGCTACAAATTCAATATACTCGGACATTAAATCACAATTCATACCAATCAAATTGCA 408441 Query 16858 CGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGC 16917 || | ||||| || | ||| || || || ||||||||| | || || | Sbjct 408442 TGGCAATGCTTCTGTAAGGAATTCCTGTTCGATTTTAACCGCTTCTCTTATTATCTCAAT 408501 Query 16918 AACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAG-ACATGCGAAATCGC 16976 | ||||| | || | || |||| |||||||||| ||| || ||||| | Sbjct 408502 GATACGTTCTCTGCTGGGCTTCTGCACCAGATACTTAAACATCAATACA-GCAAAATCAC 408560 Query 16977 AATGTAATCCCTCGTCTCTGCTGATA--AGTTCGTTAGAAAATGTCAACCCGGGCATCTT 17034 |||| || || ||||| | || |||| || ||||| || ||||| || |||||||| Sbjct 408561 AATGCAAACCTTCGTCAC-GC-GATATCAGCTCGTTGGAGAATGTTAAGCCGGGCATTAG 408618 Query 17035 TCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGAC 17094 || |||||||| ||||| || || | ||| || || |||||||| || || || Sbjct 408619 GCCACGTTTCTTCAACCAGAAAATGGAGGCAAAACTGCCGCTGAAGAATATGCCTTCAAC 408678 Query 17095 GGATGCAAACGCGATTAATCGTTCGGCGTACGTCGC-GTCTTTGTTACGA-ATCCATTTC 17152 | ||||| || |||| ||||| | | | || | | | | || |||||| | Sbjct 408679 AGCAGCAAAAGCTATTACACGTTCACCAAAATTAGCAGAATCCGAT--GATATCCATGAC 408736 Query 17153 TGCACCCACTCGGCTTTTTGCTTTATGCAATC--CATCGTTTCTATGGCCTTAAATAATT 17210 |||| || |||||| |||| || ||| ||||| ||||| || ||||| | Sbjct 408737 AAAGCCCAATCAGCTTTT--CTTTTAACAGCTGGCATAGTTTCAATGGCATTGAATAAAT 408794 Query 17211 TCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGT 17270 || || | | || | ||||| || || || || | |||||||||||| |||| Sbjct 408795 ATTCACGTTGGTCACGATCTTTAATATAGGTGTCAATAAGAATGCTGTACATTTCCGAGT 408854 Query 17271 GTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTT 17330 | | |||||||| || ||||| || || || ||||| |||||||| | || ||| || | Sbjct 408855 GAACATTCTCCATAGCAATCTGGAAGCCATAGAAGCAGCGGGCTTCAGTTACTTGCACCT 408914 Query 17331 CCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACG 17390 | | |||| || | ||||| || || || ||||| ||| || || || || | Sbjct 408915 CTTGAGAAAATCTCTCGACAAGATTCTCATTAACTATGCCATCGGAGGCAGCAAAGAAAG 408974 Query 17391 CCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAAT 17450 |||| | ||| |||||||||| |||| | ||| || |||||| | || Sbjct 408975 CCAACACATGGGAAATGAAATATCTTTCATTGTCTGTGAGTTTCTCCCAGTCAGACATAT 409034 Query 17451 CTTTGGATATATCCACTTCTTCGGGGGTCCAAAA 17484 |||| || | ||||||||| || |||||||| Sbjct 409035 CTTTAGACAGATCCACTTCCTCAACAGTCCAAAA 409068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517467696448560