Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31] 12,042 sequences; 971,188,624 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq305 206 3e-48 >seq305 Length=710094 Score = 206 bits (228), Expect = 3e-48 Identities = 473/698 (68%), Gaps = 22/698 (3%) Strand=Plus/Plus Query 16036 ATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTAT-AAGTCGTA 16094 ||||||||||||||| ||||| | ||||||| || ||||| || || || || | | | Sbjct 408382 ATCTGCTACAAATTCAATATACTCGGACATTAAATCACAATTCATACCAATCAAATTGCA 408441 Query 16095 CCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATATCGG 16154 | || |||| ||| | |||| ||||| || |||||||||| | || || || Sbjct 408442 TGGCAAT-GCTTCTGTAAGGAATTCCTGTTCGATTTTAACCGCTTCTCTTATTATCTCAA 408500 Query 16155 TGGCTCGTGTTTCAGACGGTGTA-TGGTTTAGGTGTTTAAACATTAG-ACACGCGAAGTC 16212 || ||| | || | || | || || | |||||||| | ||| || || || Sbjct 408501 TGATACGT-TCTCTGCTGGGCTTCTGCACCAGATACTTAAACATCAATACA-GCAAAATC 408558 Query 16213 GCAATGTAGTCCTTCGTCTCTGCTGATA--AGTTCGTTGGAAAAAGTTAACCCTGGCATT 16270 ||||| | |||||||| | || |||| || |||||||| || ||||| || |||||| Sbjct 408559 ACAATGCAAACCTTCGTCAC-GC-GATATCAGCTCGTTGGAGAATGTTAAGCCGGGCATT 408616 Query 16271 TTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAA--TGACCCCGAAAAGAATATACCCT 16328 || |||||||| |||||||| || | ||||| || | | ||| |||||| || | Sbjct 408617 AGGCCACGTTTCTTCAACCAGAAAATGGAGGCAAAACTGCCGCTGAA--GAATATGCCTT 408674 Query 16329 CAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGA----ATC 16384 |||||| |||||||| |||| ||||| | | ||||| | | ||| ||| Sbjct 408675 CAACAGCAGCAAAAGCTATTACACGTTCACCAAAATTAGCAG----AATCCGATGATATC 408730 Query 16385 CATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAAC 16444 ||| | |||| || |||||| ||| | | ||| ||||| ||||| || || Sbjct 408731 CATGACAAAGCCCAATCAGCTTTTCTTTTAACAGCTGGCATAGTTTCAATGGCATTGAAT 408790 Query 16445 AATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCT 16504 || | || || | | ||| | ||||| || ||||| || | ||||||||||| Sbjct 408791 AAATATTCACGTTGGTCACGATCTTTAATATAGGTGTCAATAAGAATGCTGTACATTTCC 408850 Query 16505 GAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGT 16564 ||||| | ||||| || || ||||| || ||||||||||| || || || | || ||| Sbjct 408851 GAGTGAACATTCTCCATAGCAATCTGGAAGCCATAGAAGCAGCGGGCTTCAGTTACTTGC 408910 Query 16565 ACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAA 16624 || || |||||| || | || |||||||| || || || || |||||||| Sbjct 408911 ACCTCTTGAGAAAATCTCTCGACAAGATTCTCATTAACTATGCCATCGGAGGCAGCAAAG 408970 Query 16625 AACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAATATGCCAATCTTTT 16684 || ||||| | || |||||||||| |||| | ||| || | | ||| || Sbjct 408971 AAAGCCAACACATGGGAAATGAAATATCTTTCATTGTCTGTGAGTTTCTCCCAGTCAGAC 409030 Query 16685 AAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAA 16722 | |||||| || | ||||||||| || |||||||| Sbjct 409031 ATATCTTTAGACAGATCCACTTCCTCAACAGTCCAAAA 409068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511337419347440