Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31]
12,042 sequences; 971,188,624 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq326 168 5e-37
>seq326
Length=702362
Score = 168 bits (186), Expect = 5e-37
Identities = 414/624 (66%), Gaps = 3/624 (0%)
Strand=Plus/Minus
Query 97007 TTGGGAAA-GGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACA 97065
|||||||| || ||||| | || | | ||||| | | | |||| ||| ||| |
Sbjct 510215 TTGGGAAAAGGTCTGGGTTTGCGTTTTAATTGCTCCCTCAATGGTTCAACGTGGTTCTTA 510156
Query 97066 TAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGG 97125
|| | || ||||| || || ||||| | ||| || ||||| || |||| | |||
Sbjct 510155 TATACATGGGCATCGCCCAATGTGTGTACAAAATCACCAGGCTTTAGGCCAGTTATGTGG 510096
Query 97126 GCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATA 97185
|| |||||| | || || | | ||| |||||||| || || || |||| |||||
Sbjct 510095 GCAATCATATAGGTCAACAAGGCATATGAGGCAATGTTGAATGGTACTCCTAAGCCCATG 510036
Query 97186 TCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTGACTC 97245
|| || | ||||||||| ||||| || |||| |||| ||||||||||| |
Sbjct 510035 TCGGCACTGCGTTGATATAATTGACAAGATAGCTCACCATTGGCAACATAAAACTGGGCC 509976
Query 97246 AATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACATC 97305
|| ||||||||| ||||| ||||| | || | || | | ||||||||| |||||
Sbjct 509975 AAGCAATGACAGGGAGGCAAAGCCATCTGCGGCATGTCCATGGGATTCCAAGCGGACATC 509916
Query 97306 AACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTGATCA 97365
| || | ||| || || || ||| |||| |||| ||| | ||| |||| ||| ||
Sbjct 509915 ATGATACGTCTGTCATCGGGATTAGTGCGTATTGTATGAATAACCTGTTTTAGTTGGTCC 509856
Query 97366 ACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCTCCAT 97425
|| || || |||| || | | | | | || | ||||||||||| | |||
Sbjct 509855 ACACCCTCGTTGTCATAGTTATCGTGGCAAGTTCGGTACTTAGCTCCAAAATGACGCCAC 509796
Query 97426 TGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCT 97485
|| || ||||| ||||| || | || ||||| |||| ||| |||||| ||||||||
Sbjct 509795 TGAAAACCATATACAGGACCCAAATCACCTTCCTCTCGATCCGTGAAACCGAGCTTATCC 509736
Query 97486 AAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACA-CCAGATGCTGCAAGCTCTTT 97544
||| || | | | || ||||||| ||||| | | | | ||||| |||||
Sbjct 509735 AAAAAGTCGCGTGTGCTGTTGCCATCCCATATGTGAATATTCTTGTCCTGCAGAATCTTT 509676
Query 97545 GCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAATAC 97604
|| | || | || || ||||| | | ||||| ||||| | ||||| || ||
Sbjct 509675 GC-ATTGGTGCAGCCATGTATGAACCAAATAAGCTCTTCTGCAACAGCCCTCCAGAAGAC 509617
Query 97605 TCTCTTAGTTGTTAAGAGAGGAAA 97628
| |||||| || | | ||||||
Sbjct 509616 CCGCTTAGTGGTGAGCAAAGGAAA 509593
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346733105329940
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |