Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31]
12,042 sequences; 971,188,624 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq404 145 1e-29
seq1094 141 1e-28
seq69 125 1e-23
seq1431 122 1e-22
seq998 100 4e-16
seq279 91.5 2e-13
>seq404
Length=684826
Score = 145 bits (160), Expect = 1e-29
Identities = 170/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||||||||| | |||||| |||| || |||||||| || | || ||||| | |
Sbjct 506576 ATGCAAATATTCGTTAAGACATTAACGGGAAAAACTATCACACTGGAAGTTGAACCTTCT 506635
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| || ||| | || ||||||||||| ||||||||||| || || ||||||
Sbjct 506636 GATACTATAGAAAATGTTAAGGCCAAAATTCAAGACAAAGAAGGTATTCCCCCAGATCAA 506695
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| | | ||||| || || || ||||| || || | || ||||| || |||||
Sbjct 506696 CAGCGTTTGATTTTCGCTGGCAAGCAATTGGAAGACGGACGTACATTGTCCGACTATAAC 506755
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|||||||||||||| || | |||||||| ||||| |||| ||||||||
Sbjct 506756 ATTCAAAAAGAATCTACACTACATTTGGTCCTACGTCTACGTGGTGGTAT 506805
Score = 136 bits (150), Expect = 6e-27
Identities = 189/261 (72%), Gaps = 4/261 (2%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || || | |||||| |||| ||||| || || || | ||| ||||| | |
Sbjct 506120 ATGCAGATCTTCGTGAAGACATTAACTGGCAAGACCATCACATTGGAGGTTGAACCCTCT 506179
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| ||| ||| | ||| || ||||||||||||||||| || || || ||||||
Sbjct 506180 GATACCATTGAAAATGTTAAAGCCAAGATTCAAGATAAAGAAGGCATTCCTCCAGATCAA 506239
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||| | | || ||||| || ||||| | || ||| | || || || |||||||||
Sbjct 506240 CAACGTTTGATCTTTGCCGGTAAACAGCTGGAAGATGGACGTACCTTGTCCGATTATAAT 506299
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATTC 124777
|| ||||| ||||| || | ||||||||| | ||| |||| ||||| || ||| ||
Sbjct 506300 ATCCAAAAGGAATCTACACTTCATTTGGTTCTTCGTCTACGTGGTGGCATGCAAATCTTT 506359
Query 124778 ATAAAA--ATTGA-TTGTAAA 124795
||||| ||||| | |||||
Sbjct 506360 GTAAAAACATTGACTGGTAAA 506380
Score = 136 bits (150), Expect = 6e-27
Identities = 175/240 (73%), Gaps = 1/240 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| ||| |||| ||| | || || ||||| || || | ||| |||| | |
Sbjct 506348 ATGCAAATCTTTGTAAAAACATTGACTGGTAAAACCATCACCTTGGAGGTTGAGCCTTCT 506407
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| ||| ||| | ||| ||||||||||| |||||||| || ||||| || |||
Sbjct 506408 GATACCATTGAAAATGTTAAAGCCAAAATTCAAGACAAAGAAGGAATCCCACCAGACCAA 506467
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| | | ||||| || || || || | || || | |||||||| ||||| |||
Sbjct 506468 CAGCGATTGATTTTCGCTGGCAAGCAGCTTGAAGACGGGCGAACATTGTCTGATTACAAT 506527
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATTC 124777
|||||||||||||| || ||||||||||| || || | || ||||| || ||| ||||
Sbjct 506528 ATTCAAAAAGAATCTACATTGCATTTGGTATTGCGCCTTCGTGGTGGCATGCAAATATTC 506587
Score = 123 bits (136), Expect = 4e-23
Identities = 170/238 (71%), Gaps = 0/238 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | ||||| || ||||| ||||| || || |||| | ||| ||
Sbjct 509010 ATGCAAATCTTCGTCAAGACCCTGACAGGAAAAACCATCACATTAGAAGTCGAACCATCC 509069
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| || ||| | ||| |||||||||||||||||||| || || || || |||
Sbjct 509070 GATACTATCGAAAATGTGAAAGCTAAAATTCAAGATAAAGAAGGCATTCCCCCAGACCAA 509129
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||| | | || || || || || ||||| || ||| |||| || || ||| || ||
Sbjct 509130 CAACGCTTAATCTTCGCCGGCAAGCAATTGGAAGATGGTCGCACTTTGTCAGACTACAAC 509189
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776
|| || |||||||| || | ||||| || | ||| |||| |||||||| ||| ||
Sbjct 509190 ATCCAGAAAGAATCTACCCTCCATTTAGTCCTTCGTCTACGTGGTGGTATGCAAATTT 509247
Score = 122 bits (134), Expect = 1e-22
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | ||||| || || || ||||| || ||| |||| | ||| ||
Sbjct 508782 ATGCAAATCTTCGTCAAGACCCTGACTGGAAAAACCATCACTTTAGAAGTCGAACCATCC 508841
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| ||| || | ||| || |||||||| || |||||||| || || |||||
Sbjct 508842 GATACCATTGAAAACGTCAAAGCTAAGATTCAAGACAAGGAAGGTATTCCCCCAGATCAG 508901
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||| | | || || || || ||||| || || ||| |||| ||||| ||||||||||
Sbjct 508902 CAACGTTTGATCTTCGCTGGTAAACAGTTGGAAGATGGTCGTACATTGTCAGATTATAAT 508961
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|| || |||||||| || | || ||||| | ||| | || ||||| ||
Sbjct 508962 ATCCAGAAAGAATCGACCCTCCACTTGGTACTCCGTCTCCGTGGTGGCAT 509011
Score = 95.1 bits (104), Expect = 2e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | ||||| | || || || || || || | || | ||| | |
Sbjct 509238 ATGCAAATTTTCGTCAAGACTTTGACTGGAAAGACAATTACGTTGGAAGTGGAACCCTCT 509297
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| || ||| | || |||||||||||||||||||| || || || |||||
Sbjct 509298 GATACCATAGAAAATGTCAAGGCCAAAATTCAAGATAAAGAAGGCATTCCCCCAGATCAG 509357
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||| | | || ||||| || ||||| || || ||| |||| ||||| || || ||
Sbjct 509358 CAACGTTTGATCTTTGCCGGCAAACAGTTGGAAGATGGTCGCACATTGTCGGACTACAAC 509417
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765
|| || || |||||||| | |||||||| | ||| | || || ||
Sbjct 509418 ATCCAGAAGGAATCAACACTCCATTTGGTGCTTCGTCTTCGCGGAGG 509464
>seq1094
Length=241507
Score = 141 bits (156), Expect = 1e-28
Identities = 170/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597
|||||| || ||| | ||||| ||||| || ||||| || || | ||| | || |
Sbjct 166282 AATGCAGATCTTTGTCAAGACCCTAACCGGTAAAACCATTACCTTGGAGGTAGAGCCTTC 166223
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|| || ||| ||| | || ||||| ||||| ||||||||||| ||||| |||||
Sbjct 166222 CGACACTATTGAAAATGTCAAGGCTAAAATCCAAGACAAAGAAGGTATCCCACCAGATCA 166163
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
|||| | | || ||||| || |||||||| |||||| |||| || || ||| || ||
Sbjct 166162 ACAACGTTTGATCTTTGCTGGCAAACAATTGGAGGATGGTCGCACCTTGTCAGACTACAA 166103
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|||||||| || || |||||||||||||| | ||| | || ||||||||
Sbjct 166102 CATTCAAAAGGAGTCGACTTTGCATTTGGTACTCCGTCTTCGTGGTGGTAT 166052
>seq69
Length=1433716
Score = 125 bits (138), Expect = 1e-23
Identities = 259/382 (68%), Gaps = 12/382 (3%)
Strand=Plus/Minus
Query 202868 CCAACATATCCATTTGGATCACGTCCATCTATAAAATATTTATCATTTA--AATNNNNNN 202925
|||||||| ||||| ||||| | ||||| | | ||||| ||||| | |||
Sbjct 1185319 CCAACATAACCATTAGGATCTCTGCCATCCAAACTGTATTTGTCATTAAGTAATATGGCT 1185260
Query 202926 NNNNNNNNAATGCTTCTTCTGGTGATTTTGTCCATTCTAATAtttttttAGCCCAATACA 202985
||||| | |||||| |||| || ||| ||||| |||||||||||||||||||
Sbjct 1185259 ATTTCC--AATGCCTTTTCTGGAGATTCTGACCACTCTAAGATTTTTTTAGCCCAATACA 1185202
Query 202986 TTCTTAAATATCCATGCATTTTACCATAGATAATCATTTGTTTTTGTGATGCATTCCATA 203045
| | |||| ||||||||||||| || | || || ||| |||| | |||||| |
Sbjct 1185201 TGCGTAAAAATCCATGCATTTTTCCCTCTTTAGCCAGCTGTATTTGGGCGCTATTCCAAA 1185142
Query 203046 AATTGTCATGAGTTAATG-CA-TTTTCAAGTTGATATAAACTATATATATGTTTTCTAGT 203103
| ||||| || ||| || |||||| || | ||||| || || | | |
Sbjct 1185141 GGTCATCATGGGT--ATGACAGGTTTCAAATTCCTCCAAACTGTAGCAGGGTGTACGTTT 1185084
Query 203104 ATCATTTTTATGTTCATTTAGTGTTTTTATTGCCCAATTATTAGCA--CCATTTATATTA 203161
||| || ||| ||||| || |||||| ||||| | || ||| || || | |||
Sbjct 1185083 ATCCTTACGATGATCATTGAGAGTTTTTGCGGCCCATTCAT--GCAACCCCTTGAGATTG 1185026
Query 203162 TCGTAATTTTCATTATAATAACAAAAATTATCACATAGTTCTTTACGAATAATAGCTTCT 203221
||||| || | |||| | ||||||||||| || | || ||||| ||||| ||
Sbjct 1185025 TCGTAGTTCTTATTAAAGTAACAAAAATTGTCGGCCAACTCACGACGAACTATAGCCTCC 1184966
Query 203222 TCACAAAAAACTTCTACCGATT 203243
||||||||| | || || ||||
Sbjct 1184965 TCACAAAAAGCCTCAACGGATT 1184944
>seq1431
Length=173026
Score = 122 bits (134), Expect = 1e-22
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || ||| | || || |||| ||||| || || || | || |||| | |
Sbjct 151094 ATGCAGATTTTTGTCAAAACTTTAACGGGCAAGACCATTACGCTTGAAGTTGAGCCGTCT 151153
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|||||||| ||| |||| || ||||| || ||||| || || ||||||||||||
Sbjct 151154 GATACAATAGAAAATGTAAAGGCCAAGATTCAGGACAAAGAGGGAATTCCACCTGATCAA 151213
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||| | | || ||||| |||||||| | || ||| |||| || ||| ||| || ||
Sbjct 151214 CAACGTTTAATATTTGCCGGAAAACAGCTTGAAGATGGTCGTACGTTATCAGACTACAAC 151273
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765
|| ||||| |||||||| | ||||| ||||| || || || |||||
Sbjct 151274 ATACAAAAGGAATCAACGCTTCATTTAGTTTTGCGATTGCGTGGTGG 151320
>seq998
Length=286536
Score = 100 bits (110), Expect = 4e-16
Identities = 540/820 (66%), Gaps = 85/820 (10%)
Strand=Plus/Minus
Query 228219 tataataaatgctagttctttaaaaaatttaattaatttaaaagaattggatatatctaa 228278
||||| |||| ||||| ||||||||||| | | | ||||| || || | | |||
Sbjct 236980 TATAA-AAATTTTAGTT--TTAAAAAATTTTAGTTACATAAAAATTTTTCATTT-TATAA 236925
Query 228279 caattataa---tataaatatttCATCATTACCaaaaacattaattaaattaaatattag 228335
|||| ||| |||||| |||| | ||| ||||| | | || || |||| ||||
Sbjct 236924 AAATTTTAACTATATAAAAATTTTAATTTTATCAAAATTTTAATTTTAAAAAAATTTTAG 236865
Query 228336 ttcatgtaatataaaaaatactaattttataattaatttagataatttGAAAGAATTAGA 228395
|| |||||||| | ||||||||||| | |||| || | ||||| |||
Sbjct 236864 TTT------TATAAAAATTT-TAATTTTATAAAAATTTTA-ATTTTATGAAAATTTTAAT 236813
Query 228396 TATATCTAGAAATTTTAAT---ATAAATATTTCATCATTACCAAAATCATTA----ATCA 228448
| ||| | ||| |||||| ||||| |||| | ||| ||||| | | || |
Sbjct 236812 TTTATAAA-AAACTTTAATTTTATAAAAATTTTAATTTTATAAAAATTTTAATTTTATAA 236754
Query 228449 AA--TTAAATATTAGGACA-TGTTA--TATA-AAAAATACTAATTTTATAATTAATTTAG 228502
|| |||||| ||| | | | ||| | || |||||| ||||||||||| |||||
Sbjct 236753 AAATTTAAATTTTATAAAAATTTTAATTTTATAAAAATTTTAATTTTATAAA-AATTT-- 236697
Query 228503 ATAATTTGA-AAGAATTAGATATATCTAGAAATTTTAAT--ATAAATATTTCATCATTAC 228559
|||||| | || |||| | | | || |||||||||| ||||| |||| | |||
Sbjct 236696 -TAATTTTATAAAAATTTAAATTTTATAAAAATTTTAATTTATAAAAATTTTAATTTTAT 236638
Query 228560 CAAAATCATTGATTACATTAAATATTAATTCATGTTATATAAAACACACTAATTTTATAA 228619
||||| || ||| | |||| ||| | || ||||| |||| | ||||||||||
Sbjct 236637 AAAAAT--TTTATTTTAATAAAAATTTAA--ATTTTATA-AAAATTTA--AATTTTATAA 236585
Query 228620 ATGATTTATATAATTTGAAGGAATTGGATATATCTAGAAATTATAATAT---AAATATTT 228676
| |||| | |||| | |||| | | | || ||||| |||| | ||| ||||
Sbjct 236584 AAACTTTA---AGTTTGTAAAAATTTTAATTTTATAAAAATTTTAATTTTACAAAAATTT 236528
Query 228677 CATCATTACCAAAATCATTAATCAAATTAAATATTAGTGATTGCGATATTAAAAATACTA 228736
| ||| ||||| ||||| || ||| | | | ||| ||| |||||| ||
Sbjct 236527 TAATTTTATAAAAATT-TTAATTTTATAAAAAACTT-TAATTT---TAT-AAAAATTTTA 236474
Query 228737 ATTTTATAAATGATTTAGATAATTTGA-AAGAATTAGATATATCTAACAATTATAA---T 228792
||||||| |||||||| |||||| | || |||| | | | ||| |||| ||| |
Sbjct 236473 ATTTTAT-AATGATTT---TAATTTTATAAAAATTTTAATTTTATAAAAATTTTAATTTT 236418
Query 228793 ATAAATATTTCATCATTACCAAAAACATTGACTACATTAAATATTAGTTCATGTAATATA 228852
|| | |||| | ||| ||| || | | |||| ||| || || | ||
Sbjct 236417 ATTGAAATTTTAATTTTATTGAAA--TTTTAATTTTATAAAAATT--TTAATTTTAT--- 236365
Query 228853 AAAAATACtaattttataattaatttagataatttgaaag-aattagatatatctaaaaa 228911
|||||| ||||||||| | ||||| |||||| | | |||| || | | |||||
Sbjct 236364 AAAAATTTTAATTTTAT-AGAAATTT---TAATTTTATTGAAATTTTATTTTTATAAAAT 236309
Query 228912 ttttaa---tataaatatttCATCATTACCAAAATCATTGATTACATTAAATATTAATTC 228968
|||||| |||||| |||| | ||| ||||| || ||| |||||| ||| ||
Sbjct 236308 TTTTAATTTTATAAAAATTTTAATTTTATAAAAAT-TTTAATTTTATTAAA-ATT--TTA 236253
Query 228969 ATGTTATATAAACCATACTAATTTTATAAATGATTTATAT 229008
|| |||| || || ||||||||||||| ||| |||
Sbjct 236252 ATTTTATTGAA---ATTTTAATTTTATAAATTTTTTTTAT 236216
Score = 91.5 bits (100), Expect = 2e-13
Identities = 422/637 (66%), Gaps = 71/637 (11%)
Strand=Plus/Minus
Query 228402 TAGAAATTTTAA---TATAAATATTTCATCATTACCAAAATCATTAATCAAATTAAATAT 228458
|| ||||||||| |||||| |||| | ||| |||||| | | | || |||| |
Sbjct 236927 TAAAAATTTTAACTATATAAAAATTTTAATTTTATCAAAATTTTAATTTTAAAAAAATTT 236868
Query 228459 TAGGACATGTTATATAAAAAATACTAATTTTATAATTAATTTAGATAATTTGAAAGAATT 228518
||| || |||||||| | ||||||||||| ||||| || | ||||| ||
Sbjct 236867 TAG------TTTTATAAAAATTT-TAATTTTATAA-AAATTTTAATTTTATGAAAATTTT 236816
Query 228519 AGATATATCTAGAAATTTTAA---TATAAATATTTCATCATTACCAAAATCATTGATTAC 228575
| | ||| | ||| ||||| |||||| |||| | ||| ||||| || |||
Sbjct 236815 AATTTTAT-AAAAAACTTTAATTTTATAAAAATTTTAATTTTATAAAAAT-TTTAATTTT 236758
Query 228576 ATTAAATATTAATTCATGTTATATAAAACACACTAATTTTATAAATGATTTATATAATTT 228635
|| ||| |||| || |||| ||| | |||||||||||| |||| ||||||
Sbjct 236757 ATAAAAATTTAA---ATTTTAT---AAAAATTTTAATTTTATAAA-AATTT---TAATTT 236708
Query 228636 GA-AGGAATTGGATATATCTAGAAATT---ATAATATAAATATTTCATCATTACCAAAAT 228691
| | |||| | | | || ||||| || |||||| |||| | ||| ||||
Sbjct 236707 TATAAAAATTTTAATTTTATAAAAATTTAAATTTTATAAAAATTT--TAATTTATAAAAA 236650
Query 228692 CATTAATCAAATTAAATATTAGTGATTGCGATATTAAAAATACTAATTTTATAAATGATT 228751
||||| | |||| ||| | ||| || ||||||| ||||||||||| |||
Sbjct 236649 TTTTAATTTTA-TAAAAATT--TTATT---TTAATAAAAATTTAAATTTTATAAA-AATT 236597
Query 228752 TAGATAATTTGAAAGAATTAGATATATCTAACAATTATAA---TATAAATATTTCATCAT 228808
|| || ||| || || | | | | ||| |||| ||| |||||| |||| | |
Sbjct 236596 TAAAT--TTTATAAAAACTTTAAGTTTGTAAAAATTTTAATTTTATAAAAATTTTAATTT 236539
Query 228809 TACCAAAAACATTGACTACATTAAATATTAGTTCATGTAATATAAAAAATACtaatttta 228868
|| |||||| || | | | |||| ||| || || | ||||||||| ||||||||
Sbjct 236538 TA-CAAAAATTTTAATTTTA-TAAAAATT--TTAATTT--TATAAAAAACTTTAATTTTA 236485
Query 228869 taattaatttagataatttga-aagaattagatatatctaaaaattttaa---tataaat 228924
||| ||||| |||||| | || ||| | | | |||||||||||| ||||||
Sbjct 236484 TAA-AAATTT---TAATTTTATAATGATTTTAATTTTATAAAAATTTTAATTTTATAAAA 236429
Query 228925 atttCATCATTACCAAAATCATTGATTACATT-AAATATTAATTCATGTTATATAAACCA 228983
|||| | ||| |||| || ||| ||| |||| |||||| ||||| || |
Sbjct 236428 ATTTTAATTTTATTGAAAT-TTTAATTTTATTGAAATTTTAATT----TTATAAAA---A 236377
Query 228984 TACTAATTTTATAAATGATTTATATAATTTGAAAGAA 229020
| |||||||||||| |||| |||||| | ||||
Sbjct 236376 TTTTAATTTTATAAA-AATTT---TAATTTTATAGAA 236344
Score = 89.7 bits (98), Expect = 8e-13
Identities = 392/587 (67%), Gaps = 70/587 (12%)
Strand=Plus/Minus
Query 228211 aattgtaatat--aataaatgctagttctttaaaaaatttaattaatttaaaagaattgg 228268
|||| |||| | || |||| ||||| | |||||| ||||||| ||| || ||||
Sbjct 236889 AATTTTAATTTTAAAAAAATTTTAGTTTTATAAAAATTTTAATT---TTATAAAAATTTT 236833
Query 228269 atatatctaacaattataat---ataaata--tttCATCATTACCaaaaacattaattaa 228323
| | | | | |||| |||| ||||| | ||| || ||| ||||| ||||||
Sbjct 236832 AATTTTATGAAAATTTTAATTTTATAAAAAACTTTAATT-TTAT-AAAAATTTTAATTTT 236775
Query 228324 attaaatattagttcatgtaatataaaaaatactaattttataattaatttagataattt 228383
|| ||| ||| || || | ||| ||||| |||||||||| ||||| ||||||
Sbjct 236774 ATAAAA-ATT--TTAATTTTATA---AAAATTTAAATTTTATAAA-AATTT---TAATTT 236725
Query 228384 GA-AAGAATTAGATATATCTAGAAATTTTAAT---ATAAATATTTCATCATTACCAAAAT 228439
| || |||| | | | || |||||||||| ||||| |||| | ||| |||||
Sbjct 236724 TATAAAAATTTTAATTTTATAAAAATTTTAATTTTATAAAAATTTAAATTTTATAAAAAT 236665
Query 228440 C---ATTAATCAAA--TTAAATATTAGGACA----TGTTATATAAAAAATACTAATTTTA 228490
||| || ||| || ||| ||| | | | || || |||||| |||||||
Sbjct 236664 TTTAATTTATAAAAATTTTAATTTTATAAAAATTTTATTTTAATAAAAATTTAAATTTTA 236605
Query 228491 TAATTAATTTAGATAATTTGAAAGAATTAGATATATCTAGAAATTTTAAT---ATAAATA 228547
||| |||||| || ||| || || | | | | || |||||||||| ||||| |
Sbjct 236604 TAAA-AATTTAAAT--TTTATAAAAACTTTAAGTTTGTAAAAATTTTAATTTTATAAAAA 236548
Query 228548 TTTCATCATTACCAAAATCATTGATTACATTAAATATTAATTCATGTTATATAAAACACA 228607
||| | |||| ||||| || ||| || ||| ||| || || ||||| |||||
Sbjct 236547 TTTTAATTTTACAAAAATT-TTAATTTTATAAAA-ATT--TTAATTTTATAAAAAACTT- 236493
Query 228608 CTAATTTTATAAATGATTTATATAATTT--GAAGGAATTGGATATATCTAGAAATTATAA 228665
|||||||||||| |||| |||||| || || || || | | || ||||| |||
Sbjct 236492 -TAATTTTATAAA-AATTT---TAATTTTATAATGATTTTAAT-TTTATAAAAATTTTAA 236439
Query 228666 ---TATAAATATTTCATCATTACCAAAATCATTAATCAAATT-AAATATTAGTGATTGCG 228721
|||||| |||| | ||| |||| ||||| ||| |||| ||| |||
Sbjct 236438 TTTTATAAAAATTTTAATTTTATTGAAAT-TTTAATTTTATTGAAATTTTA---ATT--- 236386
Query 228722 ATATTAAAAATACTAATTTTATAAATGATTTAGATAATTTGAAAGAA 228768
| ||||||| |||||||||||| |||| |||||| | ||||
Sbjct 236385 -TTATAAAAATTTTAATTTTATAAA-AATTT---TAATTTTATAGAA 236344
Score = 87.8 bits (96), Expect = 3e-12
Identities = 428/641 (67%), Gaps = 74/641 (12%)
Strand=Plus/Minus
Query 228528 TAGAAATTTTAA---TATAAATATTTCATCATTACCAAAATCATTGATTACATTAAATAT 228584
|| ||||||||| |||||| |||| | ||| |||||| || ||| ||||| |
Sbjct 236927 TAAAAATTTTAACTATATAAAAATTTTAATTTTATCAAAATT-TTAATT---TTAAAAA- 236873
Query 228585 TAATTCATGTTATATAAAACACACTAATTTTATAAATGATTTATATAATTTGAAGGAATT 228644
|||| ||| ||||||| | |||||||||||| |||| || | |||| ||||
Sbjct 236872 -AATTTTAGTTTTATAAAA-ATTTTAATTTTATAAAAATTTTA-ATTTTATGAA--AATT 236818
Query 228645 GGATATATCTAGAAAT-TATAAT---ATAAATATTTCATCATTACCAAAATCATTAATCA 228700
| | | || ||| | |||| ||||| |||| | ||| ||||| |||||
Sbjct 236817 TTAATTTTATAAAAAACTTTAATTTTATAAAAATTTTAATTTTATAAAAATT-TTAATTT 236759
Query 228701 AATTAAATATTAGTGATTGCGATATTAAAAATACTAATTTTATAAATGATTTAGATAATT 228760
|| ||| ||| ||| ||| |||||| |||||||||||| |||| |||||
Sbjct 236758 TATAAAAATTTAA--ATTT---TAT-AAAAATTTTAATTTTATAAA-AATTT---TAATT 236709
Query 228761 TGA-AAGAATTAGATATATCTAACAATT---ATAATATAAATATTTCATCATTACCAAAA 228816
| | || |||| | | | ||| |||| || |||||| |||| | ||| ||||
Sbjct 236708 TTATAAAAATTTTAATTTTATAAAAATTTAAATTTTATAAAAATTT--TAATTTATAAAA 236651
Query 228817 ACATTGACTACATTAAATATTAGTTCATGTAATATAAAAAATACtaattttataattaat 228876
| || | | | |||| ||| || | |||| |||||| |||||||||| |||
Sbjct 236650 ATTTTAATTTTA-TAAAAATT--TTATTTTAAT---AAAAATTTAAATTTTATAA-AAAT 236598
Query 228877 ttagataatttgaaagaattagatatatctaaaaattttaa---tataaatatttCATCA 228933
||| || ||| || || | | | | |||||||||||| |||||| |||| |
Sbjct 236597 TTAAAT--TTTATAAAAACTTTAAGTTTGTAAAAATTTTAATTTTATAAAAATTTTAATT 236540
Query 228934 TTACCAAAATCATTGATTACATTAAATATTAATTCATGTTATATAAACCATACTAATTTT 228993
|||| ||||| || ||| | |||| ||| || || ||||| ||| | | |||||||
Sbjct 236539 TTACAAAAAT-TTTAATTTTA-TAAAAATT--TTAATTTTATAAAAAACTT--TAATTTT 236486
Query 228994 ATAAATGATTTATATAATTTGA-AAGAATTAGATATATCTAACAATTATAA---TATAAA 229049
||||| |||| |||||| | || ||| | | | ||| |||| ||| ||||||
Sbjct 236485 ATAAA-AATTT---TAATTTTATAATGATTTTAATTTTATAAAAATTTTAATTTTATAAA 236430
Query 229050 TATTTCATCATTACCAAATACATTAATTGAATT-AAATATTAGTTCGTGTTATATAAAAA 229108
|||| | ||| || | |||||| ||| |||| ||| || |||| ||||
Sbjct 236429 AATTTTAATTTTATTGAA-ATTTTAATTTTATTGAAATTTTAATT----TTAT---AAAA 236378
Query 229109 ATACTAATTTTATAATTAATTTAGATAATTTGA-AAAAATT 229148
|| ||||||||||| ||||| |||||| | | |||||
Sbjct 236377 ATTTTAATTTTATAA-AAATTT---TAATTTTATAGAAATT 236341
>seq279
Length=808521
Score = 91.5 bits (100), Expect = 2e-13
Identities = 265/391 (68%), Gaps = 39/391 (10%)
Strand=Plus/Plus
Query 228171 taataatttaacaaaatcgttaattaaattaaatattagtaattgtaatataataaatgc 228230
|||||| || | ||| | ||||| || ||||| ||| |||| ||| ||| ||||
Sbjct 127742 TAATAAATTTAAAAATT--TTAATAAATTTAAAAATTT-TAATA--AATTTAA-AAATTT 127795
Query 228231 tagttctttaaaaaattt-aattaatttaaaagaattggatatatctaacaattataata 228289
|| | ||||||||||| ||| ||||||||| | || ||| || ||| |||| |||||
Sbjct 127796 TAATAAATTAAAAAATTTTAATAAATTTAAAA-ATTTTAATAAATTTAAAAATTTTAATA 127854
Query 228290 ----taaatatttCATCATTACCaaaaacattaattaaattaaatattagttcatgtaat 228345
|||| |||| | | ||||| ||||| || ||| | ||| || || || |
Sbjct 127855 AATTTAAAAATTTTAATAAATTTAAAAATTTTAATAAATTTACAAATT--TTAATATATT 127912
Query 228346 ataaaaaat---actaattttataattaatttagataatttGAAAGAATTAGATATATCT 228402
|| ||| | || ||||||| |||| ||| |||| || ||| | | ||| || |
Sbjct 127913 -TACAAATTTTAACAAATTTTA-AATT---TTAAATAAATTTAAAAATTGTAATACATTT 127967
Query 228403 AGAAATTTTAATA----TAAATATTTCATCATT---ACCAAAATCA-----TTAATCAAA 228450
| ||||||||||| |||| |||| || ||| | ||| ||| || || ||
Sbjct 127968 AAAAATTTTAATAAATTTAAAAATTTAATAATTTCGATAAAATTCAAAATTTTGATAAAT 128027
Query 228451 TTAAATATTAGGACATGTTATATAAAAAATACTAATTTTATAATTAATTTAGATAATTTG 228510
|||| | | || | || |||||| | | || | ||||| |||||| | || ||
Sbjct 128028 GTAAAAAATTCGA---TTAATTTAAAAATTTCGAAATATATAA-AAATTTAAACAAATTT 128083
Query 228511 AAAGAATTAGATATATCTAGAAATTTTAATA 228541
||| | || ||||||| || |||||||||||
Sbjct 128084 AAAAATTTCGATATATATA-AAATTTTAATA 128113
Score = 86.0 bits (94), Expect = 9e-12
Identities = 309/466 (66%), Gaps = 47/466 (10%)
Strand=Plus/Plus
Query 228237 tttaaaaaatttaattaatttaaaagaattggatatatctaacaattataata---taaa 228293
|||||||| |||||| ||||||||| | || | | || ||| |||||||||| ||||
Sbjct 127660 TTTAAAAATTTTAATAAATTTAAAA-ATTTTAACAAATTTAAAAATTATAATAAATTAAA 127718
Query 228294 tatttCATCATTACCaaaaacattaattaaattaaatatt--agttcatgtaata----t 228347
|||| | | ||||| ||||| || ||||| ||| | | || ||| | |
Sbjct 127719 AATTTTAATAAATTTAAAAATTTTAATAAATTTAAAAATTTTAATAAATTTAAAAATTTT 127778
Query 228348 aaaaaat--actaattttat--aattaa----tttagataatttGAAAGAATTAGATATA 228399
|| |||| | ||||||| |||||| ||| |||| || ||| | || ||| |
Sbjct 127779 AATAAATTTAAAAATTTTAATAAATTAAAAAATTTTAATAAATTTAAAAATTTTAATAAA 127838
Query 228400 TCTAGAAATTTTAATA----TAAATA-TTTCATCATTACCAAAATCATTAATCAAATTAA 228454
| || ||||||||||| |||| | ||| || | | ||||| ||||| || |||
Sbjct 127839 TTTAAAAATTTTAATAAATTTAAAAATTTTAATAAATTTAAAAAT-TTTAATAAATTTAC 127897
Query 228455 ATATTAGGACATGTTATATAAAAAAT-ACTAATTTTATAATTAATTTAGATAATTTGAAA 228513
| ||| | || || || ||| | || ||||||| ||| |||| |||| || |||
Sbjct 127898 AAATTTTAATATATT-TACAAATTTTAACAAATTTTA-AAT---TTTAAATAAATTTAAA 127952
Query 228514 GAATTAGATATATCTAGAAATTTTAATA----TAAATATTTCATCATT---ACCAAAATC 228566
| | ||| || || ||||||||||| |||| |||| || ||| | ||| ||
Sbjct 127953 AATTGTAATACATTTAAAAATTTTAATAAATTTAAAAATTTAATAATTTCGATAAAATTC 128012
Query 228567 A-----TTGATTACATTAAATATTAATTCATGTTATATAAAACACACTAATTTTATAAAT 228621
| ||||| | |||| ||||| | || ||||| | || | ||||||
Sbjct 128013 AAAATTTTGATAAATGTAAA---AAATTCGATTAATTTAAAAATTTCGAAATATATAAA- 128068
Query 228622 GATTTATATAATTTGAAGGAATTGGATATATCTAGAAATTATAATA 228667
||||| | || || || | || ||||||| || ||||| |||||
Sbjct 128069 AATTTAAACAAATTTAAAAATTTCGATATATATA-AAATTTTAATA 128113
Score = 84.2 bits (92), Expect = 3e-11
Identities = 182/256 (71%), Gaps = 25/256 (10%)
Strand=Plus/Plus
Query 228171 taataatttaacaaaatcgttaattaaattaaatattagtaattgtaatataataaatgc 228230
|||||| || | ||| | |||| || ||||| |||| |||| ||| ||| ||||
Sbjct 127671 TAATAAATTTAAAAATT--TTAACAAATTTAAAAATTA-TAATA--AAT-TAA-AAATTT 127723
Query 228231 tagttc-tttaaaaaatttaattaatttaaaagaattggatatatctaacaattataata 228289
|| | |||||||| |||||| ||||||||| | || ||| || ||| |||| |||||
Sbjct 127724 TAATAAATTTAAAAATTTTAATAAATTTAAAA-ATTTTAATAAATTTAAAAATTTTAATA 127782
Query 228290 ----taaatatttCATCA--TTACCaaaaacattaattaaattaaatattagttcatgta 228343
|||| |||| | | ||| ||||| ||||| || ||||| ||| || || |
Sbjct 127783 AATTTAAAAATTTTAATAAATTA--AAAAATTTTAATAAATTTAAAAATT--TTAATA-A 127837
Query 228344 atataaaaaat--actaattttataattaatttagataatttGAAAGAATTAGATATATC 228401
|| |||||| | | ||| |||| || | |||| |||| || ||| | || ||| ||
Sbjct 127838 ATTTAAAAATTTTAATAAATTTAAAAAT--TTTA-ATAAATTTAAAAATTTTAATAAATT 127894
Query 228402 TAGAAATTTTAATATA 228417
|| |||||||||||||
Sbjct 127895 TACAAATTTTAATATA 127910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755342284985600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |