Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31] 12,042 sequences; 971,188,624 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq404 145 1e-29 seq1094 141 1e-28 seq69 125 1e-23 seq1431 122 1e-22 seq998 100 4e-16 seq279 91.5 2e-13 >seq404 Length=684826 Score = 145 bits (160), Expect = 1e-29 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||||||||| | |||||| |||| || |||||||| || | || ||||| | | Sbjct 506576 ATGCAAATATTCGTTAAGACATTAACGGGAAAAACTATCACACTGGAAGTTGAACCTTCT 506635 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| || ||| | || ||||||||||| ||||||||||| || || |||||| Sbjct 506636 GATACTATAGAAAATGTTAAGGCCAAAATTCAAGACAAAGAAGGTATTCCCCCAGATCAA 506695 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | | ||||| || || || ||||| || || | || ||||| || ||||| Sbjct 506696 CAGCGTTTGATTTTCGCTGGCAAGCAATTGGAAGACGGACGTACATTGTCCGACTATAAC 506755 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||||||||| || | |||||||| ||||| |||| |||||||| Sbjct 506756 ATTCAAAAAGAATCTACACTACATTTGGTCCTACGTCTACGTGGTGGTAT 506805 Score = 136 bits (150), Expect = 6e-27 Identities = 189/261 (72%), Gaps = 4/261 (2%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | |||||| |||| ||||| || || || | ||| ||||| | | Sbjct 506120 ATGCAGATCTTCGTGAAGACATTAACTGGCAAGACCATCACATTGGAGGTTGAACCCTCT 506179 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| | ||| || ||||||||||||||||| || || || |||||| Sbjct 506180 GATACCATTGAAAATGTTAAAGCCAAGATTCAAGATAAAGAAGGCATTCCTCCAGATCAA 506239 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | || ||||| || ||||| | || ||| | || || || ||||||||| Sbjct 506240 CAACGTTTGATCTTTGCCGGTAAACAGCTGGAAGATGGACGTACCTTGTCCGATTATAAT 506299 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATTC 124777 || ||||| ||||| || | ||||||||| | ||| |||| ||||| || ||| || Sbjct 506300 ATCCAAAAGGAATCTACACTTCATTTGGTTCTTCGTCTACGTGGTGGCATGCAAATCTTT 506359 Query 124778 ATAAAA--ATTGA-TTGTAAA 124795 ||||| ||||| | ||||| Sbjct 506360 GTAAAAACATTGACTGGTAAA 506380 Score = 136 bits (150), Expect = 6e-27 Identities = 175/240 (73%), Gaps = 1/240 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| |||| ||| | || || ||||| || || | ||| |||| | | Sbjct 506348 ATGCAAATCTTTGTAAAAACATTGACTGGTAAAACCATCACCTTGGAGGTTGAGCCTTCT 506407 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| | ||| ||||||||||| |||||||| || ||||| || ||| Sbjct 506408 GATACCATTGAAAATGTTAAAGCCAAAATTCAAGACAAAGAAGGAATCCCACCAGACCAA 506467 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | | ||||| || || || || | || || | |||||||| ||||| ||| Sbjct 506468 CAGCGATTGATTTTCGCTGGCAAGCAGCTTGAAGACGGGCGAACATTGTCTGATTACAAT 506527 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATTC 124777 |||||||||||||| || ||||||||||| || || | || ||||| || ||| |||| Sbjct 506528 ATTCAAAAAGAATCTACATTGCATTTGGTATTGCGCCTTCGTGGTGGCATGCAAATATTC 506587 Score = 123 bits (136), Expect = 4e-23 Identities = 170/238 (71%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | ||||| || ||||| ||||| || || |||| | ||| || Sbjct 509010 ATGCAAATCTTCGTCAAGACCCTGACAGGAAAAACCATCACATTAGAAGTCGAACCATCC 509069 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| || ||| | ||| |||||||||||||||||||| || || || || ||| Sbjct 509070 GATACTATCGAAAATGTGAAAGCTAAAATTCAAGATAAAGAAGGCATTCCCCCAGACCAA 509129 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | || || || || || ||||| || ||| |||| || || ||| || || Sbjct 509130 CAACGCTTAATCTTCGCCGGCAAGCAATTGGAAGATGGTCGCACTTTGTCAGACTACAAC 509189 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 || || |||||||| || | ||||| || | ||| |||| |||||||| ||| || Sbjct 509190 ATCCAGAAAGAATCTACCCTCCATTTAGTCCTTCGTCTACGTGGTGGTATGCAAATTT 509247 Score = 122 bits (134), Expect = 1e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | ||||| || || || ||||| || ||| |||| | ||| || Sbjct 508782 ATGCAAATCTTCGTCAAGACCCTGACTGGAAAAACCATCACTTTAGAAGTCGAACCATCC 508841 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| || | ||| || |||||||| || |||||||| || || ||||| Sbjct 508842 GATACCATTGAAAACGTCAAAGCTAAGATTCAAGACAAGGAAGGTATTCCCCCAGATCAG 508901 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | || || || || ||||| || || ||| |||| ||||| |||||||||| Sbjct 508902 CAACGTTTGATCTTCGCTGGTAAACAGTTGGAAGATGGTCGTACATTGTCAGATTATAAT 508961 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || |||||||| || | || ||||| | ||| | || ||||| || Sbjct 508962 ATCCAGAAAGAATCGACCCTCCACTTGGTACTCCGTCTCCGTGGTGGCAT 509011 Score = 95.1 bits (104), Expect = 2e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | ||||| | || || || || || || | || | ||| | | Sbjct 509238 ATGCAAATTTTCGTCAAGACTTTGACTGGAAAGACAATTACGTTGGAAGTGGAACCCTCT 509297 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| || ||| | || |||||||||||||||||||| || || || ||||| Sbjct 509298 GATACCATAGAAAATGTCAAGGCCAAAATTCAAGATAAAGAAGGCATTCCCCCAGATCAG 509357 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | || ||||| || ||||| || || ||| |||| ||||| || || || Sbjct 509358 CAACGTTTGATCTTTGCCGGCAAACAGTTGGAAGATGGTCGCACATTGTCGGACTACAAC 509417 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 || || || |||||||| | |||||||| | ||| | || || || Sbjct 509418 ATCCAGAAGGAATCAACACTCCATTTGGTGCTTCGTCTTCGCGGAGG 509464 >seq1094 Length=241507 Score = 141 bits (156), Expect = 1e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || ||| | ||||| ||||| || ||||| || || | ||| | || | Sbjct 166282 AATGCAGATCTTTGTCAAGACCCTAACCGGTAAAACCATTACCTTGGAGGTAGAGCCTTC 166223 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| ||| | || ||||| ||||| ||||||||||| ||||| ||||| Sbjct 166222 CGACACTATTGAAAATGTCAAGGCTAAAATCCAAGACAAAGAAGGTATCCCACCAGATCA 166163 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | | || ||||| || |||||||| |||||| |||| || || ||| || || Sbjct 166162 ACAACGTTTGATCTTTGCTGGCAAACAATTGGAGGATGGTCGCACCTTGTCAGACTACAA 166103 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||| || || |||||||||||||| | ||| | || |||||||| Sbjct 166102 CATTCAAAAGGAGTCGACTTTGCATTTGGTACTCCGTCTTCGTGGTGGTAT 166052 >seq69 Length=1433716 Score = 125 bits (138), Expect = 1e-23 Identities = 259/382 (68%), Gaps = 12/382 (3%) Strand=Plus/Minus Query 202868 CCAACATATCCATTTGGATCACGTCCATCTATAAAATATTTATCATTTA--AATNNNNNN 202925 |||||||| ||||| ||||| | ||||| | | ||||| ||||| | ||| Sbjct 1185319 CCAACATAACCATTAGGATCTCTGCCATCCAAACTGTATTTGTCATTAAGTAATATGGCT 1185260 Query 202926 NNNNNNNNAATGCTTCTTCTGGTGATTTTGTCCATTCTAATAtttttttAGCCCAATACA 202985 ||||| | |||||| |||| || ||| ||||| ||||||||||||||||||| Sbjct 1185259 ATTTCC--AATGCCTTTTCTGGAGATTCTGACCACTCTAAGATTTTTTTAGCCCAATACA 1185202 Query 202986 TTCTTAAATATCCATGCATTTTACCATAGATAATCATTTGTTTTTGTGATGCATTCCATA 203045 | | |||| ||||||||||||| || | || || ||| |||| | |||||| | Sbjct 1185201 TGCGTAAAAATCCATGCATTTTTCCCTCTTTAGCCAGCTGTATTTGGGCGCTATTCCAAA 1185142 Query 203046 AATTGTCATGAGTTAATG-CA-TTTTCAAGTTGATATAAACTATATATATGTTTTCTAGT 203103 | ||||| || ||| || |||||| || | ||||| || || | | | Sbjct 1185141 GGTCATCATGGGT--ATGACAGGTTTCAAATTCCTCCAAACTGTAGCAGGGTGTACGTTT 1185084 Query 203104 ATCATTTTTATGTTCATTTAGTGTTTTTATTGCCCAATTATTAGCA--CCATTTATATTA 203161 ||| || ||| ||||| || |||||| ||||| | || ||| || || | ||| Sbjct 1185083 ATCCTTACGATGATCATTGAGAGTTTTTGCGGCCCATTCAT--GCAACCCCTTGAGATTG 1185026 Query 203162 TCGTAATTTTCATTATAATAACAAAAATTATCACATAGTTCTTTACGAATAATAGCTTCT 203221 ||||| || | |||| | ||||||||||| || | || ||||| ||||| || Sbjct 1185025 TCGTAGTTCTTATTAAAGTAACAAAAATTGTCGGCCAACTCACGACGAACTATAGCCTCC 1184966 Query 203222 TCACAAAAAACTTCTACCGATT 203243 ||||||||| | || || |||| Sbjct 1184965 TCACAAAAAGCCTCAACGGATT 1184944 >seq1431 Length=173026 Score = 122 bits (134), Expect = 1e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | || || |||| ||||| || || || | || |||| | | Sbjct 151094 ATGCAGATTTTTGTCAAAACTTTAACGGGCAAGACCATTACGCTTGAAGTTGAGCCGTCT 151153 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 |||||||| ||| |||| || ||||| || ||||| || || |||||||||||| Sbjct 151154 GATACAATAGAAAATGTAAAGGCCAAGATTCAGGACAAAGAGGGAATTCCACCTGATCAA 151213 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | || ||||| |||||||| | || ||| |||| || ||| ||| || || Sbjct 151214 CAACGTTTAATATTTGCCGGAAAACAGCTTGAAGATGGTCGTACGTTATCAGACTACAAC 151273 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 || ||||| |||||||| | ||||| ||||| || || || ||||| Sbjct 151274 ATACAAAAGGAATCAACGCTTCATTTAGTTTTGCGATTGCGTGGTGG 151320 >seq998 Length=286536 Score = 100 bits (110), Expect = 4e-16 Identities = 540/820 (66%), Gaps = 85/820 (10%) Strand=Plus/Minus Query 228219 tataataaatgctagttctttaaaaaatttaattaatttaaaagaattggatatatctaa 228278 ||||| |||| ||||| ||||||||||| | | | ||||| || || | | ||| Sbjct 236980 TATAA-AAATTTTAGTT--TTAAAAAATTTTAGTTACATAAAAATTTTTCATTT-TATAA 236925 Query 228279 caattataa---tataaatatttCATCATTACCaaaaacattaattaaattaaatattag 228335 |||| ||| |||||| |||| | ||| ||||| | | || || |||| |||| Sbjct 236924 AAATTTTAACTATATAAAAATTTTAATTTTATCAAAATTTTAATTTTAAAAAAATTTTAG 236865 Query 228336 ttcatgtaatataaaaaatactaattttataattaatttagataatttGAAAGAATTAGA 228395 || |||||||| | ||||||||||| | |||| || | ||||| ||| Sbjct 236864 TTT------TATAAAAATTT-TAATTTTATAAAAATTTTA-ATTTTATGAAAATTTTAAT 236813 Query 228396 TATATCTAGAAATTTTAAT---ATAAATATTTCATCATTACCAAAATCATTA----ATCA 228448 | ||| | ||| |||||| ||||| |||| | ||| ||||| | | || | Sbjct 236812 TTTATAAA-AAACTTTAATTTTATAAAAATTTTAATTTTATAAAAATTTTAATTTTATAA 236754 Query 228449 AA--TTAAATATTAGGACA-TGTTA--TATA-AAAAATACTAATTTTATAATTAATTTAG 228502 || |||||| ||| | | | ||| | || |||||| ||||||||||| ||||| Sbjct 236753 AAATTTAAATTTTATAAAAATTTTAATTTTATAAAAATTTTAATTTTATAAA-AATTT-- 236697 Query 228503 ATAATTTGA-AAGAATTAGATATATCTAGAAATTTTAAT--ATAAATATTTCATCATTAC 228559 |||||| | || |||| | | | || |||||||||| ||||| |||| | ||| Sbjct 236696 -TAATTTTATAAAAATTTAAATTTTATAAAAATTTTAATTTATAAAAATTTTAATTTTAT 236638 Query 228560 CAAAATCATTGATTACATTAAATATTAATTCATGTTATATAAAACACACTAATTTTATAA 228619 ||||| || ||| | |||| ||| | || ||||| |||| | |||||||||| Sbjct 236637 AAAAAT--TTTATTTTAATAAAAATTTAA--ATTTTATA-AAAATTTA--AATTTTATAA 236585 Query 228620 ATGATTTATATAATTTGAAGGAATTGGATATATCTAGAAATTATAATAT---AAATATTT 228676 | |||| | |||| | |||| | | | || ||||| |||| | ||| |||| Sbjct 236584 AAACTTTA---AGTTTGTAAAAATTTTAATTTTATAAAAATTTTAATTTTACAAAAATTT 236528 Query 228677 CATCATTACCAAAATCATTAATCAAATTAAATATTAGTGATTGCGATATTAAAAATACTA 228736 | ||| ||||| ||||| || ||| | | | ||| ||| |||||| || Sbjct 236527 TAATTTTATAAAAATT-TTAATTTTATAAAAAACTT-TAATTT---TAT-AAAAATTTTA 236474 Query 228737 ATTTTATAAATGATTTAGATAATTTGA-AAGAATTAGATATATCTAACAATTATAA---T 228792 ||||||| |||||||| |||||| | || |||| | | | ||| |||| ||| | Sbjct 236473 ATTTTAT-AATGATTT---TAATTTTATAAAAATTTTAATTTTATAAAAATTTTAATTTT 236418 Query 228793 ATAAATATTTCATCATTACCAAAAACATTGACTACATTAAATATTAGTTCATGTAATATA 228852 || | |||| | ||| ||| || | | |||| ||| || || | || Sbjct 236417 ATTGAAATTTTAATTTTATTGAAA--TTTTAATTTTATAAAAATT--TTAATTTTAT--- 236365 Query 228853 AAAAATACtaattttataattaatttagataatttgaaag-aattagatatatctaaaaa 228911 |||||| ||||||||| | ||||| |||||| | | |||| || | | ||||| Sbjct 236364 AAAAATTTTAATTTTAT-AGAAATTT---TAATTTTATTGAAATTTTATTTTTATAAAAT 236309 Query 228912 ttttaa---tataaatatttCATCATTACCAAAATCATTGATTACATTAAATATTAATTC 228968 |||||| |||||| |||| | ||| ||||| || ||| |||||| ||| || Sbjct 236308 TTTTAATTTTATAAAAATTTTAATTTTATAAAAAT-TTTAATTTTATTAAA-ATT--TTA 236253 Query 228969 ATGTTATATAAACCATACTAATTTTATAAATGATTTATAT 229008 || |||| || || ||||||||||||| ||| ||| Sbjct 236252 ATTTTATTGAA---ATTTTAATTTTATAAATTTTTTTTAT 236216 Score = 91.5 bits (100), Expect = 2e-13 Identities = 422/637 (66%), Gaps = 71/637 (11%) Strand=Plus/Minus Query 228402 TAGAAATTTTAA---TATAAATATTTCATCATTACCAAAATCATTAATCAAATTAAATAT 228458 || ||||||||| |||||| |||| | ||| |||||| | | | || |||| | Sbjct 236927 TAAAAATTTTAACTATATAAAAATTTTAATTTTATCAAAATTTTAATTTTAAAAAAATTT 236868 Query 228459 TAGGACATGTTATATAAAAAATACTAATTTTATAATTAATTTAGATAATTTGAAAGAATT 228518 ||| || |||||||| | ||||||||||| ||||| || | ||||| || Sbjct 236867 TAG------TTTTATAAAAATTT-TAATTTTATAA-AAATTTTAATTTTATGAAAATTTT 236816 Query 228519 AGATATATCTAGAAATTTTAA---TATAAATATTTCATCATTACCAAAATCATTGATTAC 228575 | | ||| | ||| ||||| |||||| |||| | ||| ||||| || ||| Sbjct 236815 AATTTTAT-AAAAAACTTTAATTTTATAAAAATTTTAATTTTATAAAAAT-TTTAATTTT 236758 Query 228576 ATTAAATATTAATTCATGTTATATAAAACACACTAATTTTATAAATGATTTATATAATTT 228635 || ||| |||| || |||| ||| | |||||||||||| |||| |||||| Sbjct 236757 ATAAAAATTTAA---ATTTTAT---AAAAATTTTAATTTTATAAA-AATTT---TAATTT 236708 Query 228636 GA-AGGAATTGGATATATCTAGAAATT---ATAATATAAATATTTCATCATTACCAAAAT 228691 | | |||| | | | || ||||| || |||||| |||| | ||| |||| Sbjct 236707 TATAAAAATTTTAATTTTATAAAAATTTAAATTTTATAAAAATTT--TAATTTATAAAAA 236650 Query 228692 CATTAATCAAATTAAATATTAGTGATTGCGATATTAAAAATACTAATTTTATAAATGATT 228751 ||||| | |||| ||| | ||| || ||||||| ||||||||||| ||| Sbjct 236649 TTTTAATTTTA-TAAAAATT--TTATT---TTAATAAAAATTTAAATTTTATAAA-AATT 236597 Query 228752 TAGATAATTTGAAAGAATTAGATATATCTAACAATTATAA---TATAAATATTTCATCAT 228808 || || ||| || || | | | | ||| |||| ||| |||||| |||| | | Sbjct 236596 TAAAT--TTTATAAAAACTTTAAGTTTGTAAAAATTTTAATTTTATAAAAATTTTAATTT 236539 Query 228809 TACCAAAAACATTGACTACATTAAATATTAGTTCATGTAATATAAAAAATACtaatttta 228868 || |||||| || | | | |||| ||| || || | ||||||||| |||||||| Sbjct 236538 TA-CAAAAATTTTAATTTTA-TAAAAATT--TTAATTT--TATAAAAAACTTTAATTTTA 236485 Query 228869 taattaatttagataatttga-aagaattagatatatctaaaaattttaa---tataaat 228924 ||| ||||| |||||| | || ||| | | | |||||||||||| |||||| Sbjct 236484 TAA-AAATTT---TAATTTTATAATGATTTTAATTTTATAAAAATTTTAATTTTATAAAA 236429 Query 228925 atttCATCATTACCAAAATCATTGATTACATT-AAATATTAATTCATGTTATATAAACCA 228983 |||| | ||| |||| || ||| ||| |||| |||||| ||||| || | Sbjct 236428 ATTTTAATTTTATTGAAAT-TTTAATTTTATTGAAATTTTAATT----TTATAAAA---A 236377 Query 228984 TACTAATTTTATAAATGATTTATATAATTTGAAAGAA 229020 | |||||||||||| |||| |||||| | |||| Sbjct 236376 TTTTAATTTTATAAA-AATTT---TAATTTTATAGAA 236344 Score = 89.7 bits (98), Expect = 8e-13 Identities = 392/587 (67%), Gaps = 70/587 (12%) Strand=Plus/Minus Query 228211 aattgtaatat--aataaatgctagttctttaaaaaatttaattaatttaaaagaattgg 228268 |||| |||| | || |||| ||||| | |||||| ||||||| ||| || |||| Sbjct 236889 AATTTTAATTTTAAAAAAATTTTAGTTTTATAAAAATTTTAATT---TTATAAAAATTTT 236833 Query 228269 atatatctaacaattataat---ataaata--tttCATCATTACCaaaaacattaattaa 228323 | | | | | |||| |||| ||||| | ||| || ||| ||||| |||||| Sbjct 236832 AATTTTATGAAAATTTTAATTTTATAAAAAACTTTAATT-TTAT-AAAAATTTTAATTTT 236775 Query 228324 attaaatattagttcatgtaatataaaaaatactaattttataattaatttagataattt 228383 || ||| ||| || || | ||| ||||| |||||||||| ||||| |||||| Sbjct 236774 ATAAAA-ATT--TTAATTTTATA---AAAATTTAAATTTTATAAA-AATTT---TAATTT 236725 Query 228384 GA-AAGAATTAGATATATCTAGAAATTTTAAT---ATAAATATTTCATCATTACCAAAAT 228439 | || |||| | | | || |||||||||| ||||| |||| | ||| ||||| Sbjct 236724 TATAAAAATTTTAATTTTATAAAAATTTTAATTTTATAAAAATTTAAATTTTATAAAAAT 236665 Query 228440 C---ATTAATCAAA--TTAAATATTAGGACA----TGTTATATAAAAAATACTAATTTTA 228490 ||| || ||| || ||| ||| | | | || || |||||| ||||||| Sbjct 236664 TTTAATTTATAAAAATTTTAATTTTATAAAAATTTTATTTTAATAAAAATTTAAATTTTA 236605 Query 228491 TAATTAATTTAGATAATTTGAAAGAATTAGATATATCTAGAAATTTTAAT---ATAAATA 228547 ||| |||||| || ||| || || | | | | || |||||||||| ||||| | Sbjct 236604 TAAA-AATTTAAAT--TTTATAAAAACTTTAAGTTTGTAAAAATTTTAATTTTATAAAAA 236548 Query 228548 TTTCATCATTACCAAAATCATTGATTACATTAAATATTAATTCATGTTATATAAAACACA 228607 ||| | |||| ||||| || ||| || ||| ||| || || ||||| ||||| Sbjct 236547 TTTTAATTTTACAAAAATT-TTAATTTTATAAAA-ATT--TTAATTTTATAAAAAACTT- 236493 Query 228608 CTAATTTTATAAATGATTTATATAATTT--GAAGGAATTGGATATATCTAGAAATTATAA 228665 |||||||||||| |||| |||||| || || || || | | || ||||| ||| Sbjct 236492 -TAATTTTATAAA-AATTT---TAATTTTATAATGATTTTAAT-TTTATAAAAATTTTAA 236439 Query 228666 ---TATAAATATTTCATCATTACCAAAATCATTAATCAAATT-AAATATTAGTGATTGCG 228721 |||||| |||| | ||| |||| ||||| ||| |||| ||| ||| Sbjct 236438 TTTTATAAAAATTTTAATTTTATTGAAAT-TTTAATTTTATTGAAATTTTA---ATT--- 236386 Query 228722 ATATTAAAAATACTAATTTTATAAATGATTTAGATAATTTGAAAGAA 228768 | ||||||| |||||||||||| |||| |||||| | |||| Sbjct 236385 -TTATAAAAATTTTAATTTTATAAA-AATTT---TAATTTTATAGAA 236344 Score = 87.8 bits (96), Expect = 3e-12 Identities = 428/641 (67%), Gaps = 74/641 (12%) Strand=Plus/Minus Query 228528 TAGAAATTTTAA---TATAAATATTTCATCATTACCAAAATCATTGATTACATTAAATAT 228584 || ||||||||| |||||| |||| | ||| |||||| || ||| ||||| | Sbjct 236927 TAAAAATTTTAACTATATAAAAATTTTAATTTTATCAAAATT-TTAATT---TTAAAAA- 236873 Query 228585 TAATTCATGTTATATAAAACACACTAATTTTATAAATGATTTATATAATTTGAAGGAATT 228644 |||| ||| ||||||| | |||||||||||| |||| || | |||| |||| Sbjct 236872 -AATTTTAGTTTTATAAAA-ATTTTAATTTTATAAAAATTTTA-ATTTTATGAA--AATT 236818 Query 228645 GGATATATCTAGAAAT-TATAAT---ATAAATATTTCATCATTACCAAAATCATTAATCA 228700 | | | || ||| | |||| ||||| |||| | ||| ||||| ||||| Sbjct 236817 TTAATTTTATAAAAAACTTTAATTTTATAAAAATTTTAATTTTATAAAAATT-TTAATTT 236759 Query 228701 AATTAAATATTAGTGATTGCGATATTAAAAATACTAATTTTATAAATGATTTAGATAATT 228760 || ||| ||| ||| ||| |||||| |||||||||||| |||| ||||| Sbjct 236758 TATAAAAATTTAA--ATTT---TAT-AAAAATTTTAATTTTATAAA-AATTT---TAATT 236709 Query 228761 TGA-AAGAATTAGATATATCTAACAATT---ATAATATAAATATTTCATCATTACCAAAA 228816 | | || |||| | | | ||| |||| || |||||| |||| | ||| |||| Sbjct 236708 TTATAAAAATTTTAATTTTATAAAAATTTAAATTTTATAAAAATTT--TAATTTATAAAA 236651 Query 228817 ACATTGACTACATTAAATATTAGTTCATGTAATATAAAAAATACtaattttataattaat 228876 | || | | | |||| ||| || | |||| |||||| |||||||||| ||| Sbjct 236650 ATTTTAATTTTA-TAAAAATT--TTATTTTAAT---AAAAATTTAAATTTTATAA-AAAT 236598 Query 228877 ttagataatttgaaagaattagatatatctaaaaattttaa---tataaatatttCATCA 228933 ||| || ||| || || | | | | |||||||||||| |||||| |||| | Sbjct 236597 TTAAAT--TTTATAAAAACTTTAAGTTTGTAAAAATTTTAATTTTATAAAAATTTTAATT 236540 Query 228934 TTACCAAAATCATTGATTACATTAAATATTAATTCATGTTATATAAACCATACTAATTTT 228993 |||| ||||| || ||| | |||| ||| || || ||||| ||| | | ||||||| Sbjct 236539 TTACAAAAAT-TTTAATTTTA-TAAAAATT--TTAATTTTATAAAAAACTT--TAATTTT 236486 Query 228994 ATAAATGATTTATATAATTTGA-AAGAATTAGATATATCTAACAATTATAA---TATAAA 229049 ||||| |||| |||||| | || ||| | | | ||| |||| ||| |||||| Sbjct 236485 ATAAA-AATTT---TAATTTTATAATGATTTTAATTTTATAAAAATTTTAATTTTATAAA 236430 Query 229050 TATTTCATCATTACCAAATACATTAATTGAATT-AAATATTAGTTCGTGTTATATAAAAA 229108 |||| | ||| || | |||||| ||| |||| ||| || |||| |||| Sbjct 236429 AATTTTAATTTTATTGAA-ATTTTAATTTTATTGAAATTTTAATT----TTAT---AAAA 236378 Query 229109 ATACTAATTTTATAATTAATTTAGATAATTTGA-AAAAATT 229148 || ||||||||||| ||||| |||||| | | ||||| Sbjct 236377 ATTTTAATTTTATAA-AAATTT---TAATTTTATAGAAATT 236341 >seq279 Length=808521 Score = 91.5 bits (100), Expect = 2e-13 Identities = 265/391 (68%), Gaps = 39/391 (10%) Strand=Plus/Plus Query 228171 taataatttaacaaaatcgttaattaaattaaatattagtaattgtaatataataaatgc 228230 |||||| || | ||| | ||||| || ||||| ||| |||| ||| ||| |||| Sbjct 127742 TAATAAATTTAAAAATT--TTAATAAATTTAAAAATTT-TAATA--AATTTAA-AAATTT 127795 Query 228231 tagttctttaaaaaattt-aattaatttaaaagaattggatatatctaacaattataata 228289 || | ||||||||||| ||| ||||||||| | || ||| || ||| |||| ||||| Sbjct 127796 TAATAAATTAAAAAATTTTAATAAATTTAAAA-ATTTTAATAAATTTAAAAATTTTAATA 127854 Query 228290 ----taaatatttCATCATTACCaaaaacattaattaaattaaatattagttcatgtaat 228345 |||| |||| | | ||||| ||||| || ||| | ||| || || || | Sbjct 127855 AATTTAAAAATTTTAATAAATTTAAAAATTTTAATAAATTTACAAATT--TTAATATATT 127912 Query 228346 ataaaaaat---actaattttataattaatttagataatttGAAAGAATTAGATATATCT 228402 || ||| | || ||||||| |||| ||| |||| || ||| | | ||| || | Sbjct 127913 -TACAAATTTTAACAAATTTTA-AATT---TTAAATAAATTTAAAAATTGTAATACATTT 127967 Query 228403 AGAAATTTTAATA----TAAATATTTCATCATT---ACCAAAATCA-----TTAATCAAA 228450 | ||||||||||| |||| |||| || ||| | ||| ||| || || || Sbjct 127968 AAAAATTTTAATAAATTTAAAAATTTAATAATTTCGATAAAATTCAAAATTTTGATAAAT 128027 Query 228451 TTAAATATTAGGACATGTTATATAAAAAATACTAATTTTATAATTAATTTAGATAATTTG 228510 |||| | | || | || |||||| | | || | ||||| |||||| | || || Sbjct 128028 GTAAAAAATTCGA---TTAATTTAAAAATTTCGAAATATATAA-AAATTTAAACAAATTT 128083 Query 228511 AAAGAATTAGATATATCTAGAAATTTTAATA 228541 ||| | || ||||||| || ||||||||||| Sbjct 128084 AAAAATTTCGATATATATA-AAATTTTAATA 128113 Score = 86.0 bits (94), Expect = 9e-12 Identities = 309/466 (66%), Gaps = 47/466 (10%) Strand=Plus/Plus Query 228237 tttaaaaaatttaattaatttaaaagaattggatatatctaacaattataata---taaa 228293 |||||||| |||||| ||||||||| | || | | || ||| |||||||||| |||| Sbjct 127660 TTTAAAAATTTTAATAAATTTAAAA-ATTTTAACAAATTTAAAAATTATAATAAATTAAA 127718 Query 228294 tatttCATCATTACCaaaaacattaattaaattaaatatt--agttcatgtaata----t 228347 |||| | | ||||| ||||| || ||||| ||| | | || ||| | | Sbjct 127719 AATTTTAATAAATTTAAAAATTTTAATAAATTTAAAAATTTTAATAAATTTAAAAATTTT 127778 Query 228348 aaaaaat--actaattttat--aattaa----tttagataatttGAAAGAATTAGATATA 228399 || |||| | ||||||| |||||| ||| |||| || ||| | || ||| | Sbjct 127779 AATAAATTTAAAAATTTTAATAAATTAAAAAATTTTAATAAATTTAAAAATTTTAATAAA 127838 Query 228400 TCTAGAAATTTTAATA----TAAATA-TTTCATCATTACCAAAATCATTAATCAAATTAA 228454 | || ||||||||||| |||| | ||| || | | ||||| ||||| || ||| Sbjct 127839 TTTAAAAATTTTAATAAATTTAAAAATTTTAATAAATTTAAAAAT-TTTAATAAATTTAC 127897 Query 228455 ATATTAGGACATGTTATATAAAAAAT-ACTAATTTTATAATTAATTTAGATAATTTGAAA 228513 | ||| | || || || ||| | || ||||||| ||| |||| |||| || ||| Sbjct 127898 AAATTTTAATATATT-TACAAATTTTAACAAATTTTA-AAT---TTTAAATAAATTTAAA 127952 Query 228514 GAATTAGATATATCTAGAAATTTTAATA----TAAATATTTCATCATT---ACCAAAATC 228566 | | ||| || || ||||||||||| |||| |||| || ||| | ||| || Sbjct 127953 AATTGTAATACATTTAAAAATTTTAATAAATTTAAAAATTTAATAATTTCGATAAAATTC 128012 Query 228567 A-----TTGATTACATTAAATATTAATTCATGTTATATAAAACACACTAATTTTATAAAT 228621 | ||||| | |||| ||||| | || ||||| | || | |||||| Sbjct 128013 AAAATTTTGATAAATGTAAA---AAATTCGATTAATTTAAAAATTTCGAAATATATAAA- 128068 Query 228622 GATTTATATAATTTGAAGGAATTGGATATATCTAGAAATTATAATA 228667 ||||| | || || || | || ||||||| || ||||| ||||| Sbjct 128069 AATTTAAACAAATTTAAAAATTTCGATATATATA-AAATTTTAATA 128113 Score = 84.2 bits (92), Expect = 3e-11 Identities = 182/256 (71%), Gaps = 25/256 (10%) Strand=Plus/Plus Query 228171 taataatttaacaaaatcgttaattaaattaaatattagtaattgtaatataataaatgc 228230 |||||| || | ||| | |||| || ||||| |||| |||| ||| ||| |||| Sbjct 127671 TAATAAATTTAAAAATT--TTAACAAATTTAAAAATTA-TAATA--AAT-TAA-AAATTT 127723 Query 228231 tagttc-tttaaaaaatttaattaatttaaaagaattggatatatctaacaattataata 228289 || | |||||||| |||||| ||||||||| | || ||| || ||| |||| ||||| Sbjct 127724 TAATAAATTTAAAAATTTTAATAAATTTAAAA-ATTTTAATAAATTTAAAAATTTTAATA 127782 Query 228290 ----taaatatttCATCA--TTACCaaaaacattaattaaattaaatattagttcatgta 228343 |||| |||| | | ||| ||||| ||||| || ||||| ||| || || | Sbjct 127783 AATTTAAAAATTTTAATAAATTA--AAAAATTTTAATAAATTTAAAAATT--TTAATA-A 127837 Query 228344 atataaaaaat--actaattttataattaatttagataatttGAAAGAATTAGATATATC 228401 || |||||| | | ||| |||| || | |||| |||| || ||| | || ||| || Sbjct 127838 ATTTAAAAATTTTAATAAATTTAAAAAT--TTTA-ATAAATTTAAAAATTTTAATAAATT 127894 Query 228402 TAGAAATTTTAATATA 228417 || ||||||||||||| Sbjct 127895 TACAAATTTTAATATA 127910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755342284985600