Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31] 12,042 sequences; 971,188,624 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq326 143 2e-29 >seq326 Length=702362 Score = 143 bits (158), Expect = 2e-29 Identities = 377/569 (66%), Gaps = 20/569 (4%) Strand=Plus/Plus Query 20215 GAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATG-- 20272 || || |||||||||||||| ||||| ||||| ||| | |||||||||||| | || Sbjct 509764 GAAGGTGATTTGGGTCCTGTATATGGTTTTCAGTGGCGTCATTTTGGAGCTAAGTACCGA 509823 Query 20273 --TTGACATGAACACAAATTATTTTGGACAAGGAG----TAGATCAATTACAAAATGTTA 20326 ||| || || || ||| ||||| ||| | || ||| || || | |||| Sbjct 509824 ACTTGCCACGATAAC----TAT----GACAACGAGGGTGTGGACCAACTAAAACAGGTTA 509875 Query 20327 TTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTA 20386 || || ||| || || || | |||||| | || || | | ||| ||||| | | Sbjct 509876 TTCATACAATACGCACTAATCCCGATGACAGACGTATCATGATGTCCGCTTGGAATCCCA 509935 Query 20387 AAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATG-CCAATTTTACGTTGCT 20445 || |||| |||||||||||||| |||||| |||| | ||| ||||| ||||| Sbjct 509936 TGGACATGCCGCAGATGGCTTTGCCTCCCTGTCAT-TGCTTGGCCCAGTTTTATGTTGCC 509994 Query 20446 AATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCT 20505 ||| ||| | || |||||| | |||||||| || || ||||| | || || || Sbjct 509995 AATGGTGAGCTATCTTGTCAATTATATCAACGCAGTGCCGACATGGGCTTAGGAGTACCA 510054 Query 20506 TTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAA 20565 ||||| ||||| ||||| || | || ||||||||||| || | || | |||| Sbjct 510055 TTCAACATTGCCTCATATGCCTTGTTGACCTATATGATTGCCCACATAACTGGCCTAAAG 510114 Query 20566 ACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCT 20625 | ||||| || || ||||| | || || || ||| | || || || | ||||| Sbjct 510115 CCTGGTGATTTTGTACACACATTGGGCGATGCCCATGTATATAAGAACCACGTTGAACCA 510174 Query 20626 TTAAAATTACAGTTAACACG-ACAACCAAAACAATTCCCAACTCTTCGCATTACTCGAAC 20684 || | || |||| ||| | | ||| | | ||||||| | | || | || | Sbjct 510175 TTGAGGGAGCAATTAAAACGCAAACCCAGACCTTTTCCCAAAT-TGATAATCAAACGTAA 510233 Query 20685 TGTTAAAGATATTAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATCCCCA 20744 || |||||||| | || |||||| ||| ||||| | | | | ||| || || | Sbjct 510234 AGTAGAAGATATTGAGGACTTTAAATTTGAAGATTTCGAAATTGTCGATTACAAACCATA 510293 Query 20745 TAATTCAATTCCAATGGAAATGTCTGTTT 20773 | ||||| |||||||||| |||||| Sbjct 510294 TCCAAAAATTCAAATGGAAATGGCTGTTT 510322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399125415007690