Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31]
12,042 sequences; 971,188,624 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq305 233 2e-56
>seq305
Length=710094
Score = 233 bits (258), Expect = 2e-56
Identities = 383/544 (70%), Gaps = 10/544 (2%)
Strand=Plus/Plus
Query 14186 AGATGTTTAAAAATTAA-ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAG 14244
|||| ||||| || || ||| |||||||||||||| | || || || | || ||
Sbjct 408530 AGATACTTAAACATCAATACA-GCAAAATCACAATGCAAACCTTCGTCACGCGATATCAG 408588
Query 14245 TTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGC 14304
||||| || |||||||| || ||||| | || ||||| || ||||| || || | ||
Sbjct 408589 CTCGTTGGAGAATGTTAAGCCGGGCATTAGGCCACGTTTCTTCAACCAGAAAATGGAGGC 408648
Query 14305 GAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAA 14364
|| ||| |||||||| || ||||| |||||||| ||||||| ||||| |||||
Sbjct 408649 AAAACTGCCGCTGAAGAATATGCCTTCAACAGCAGCAAAAGCTATTACACGTTCACCAAA 408708
Query 14365 CGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATC 14424
|| | ||||||||| |||||| |||| |||| |||||| |
Sbjct 408709 ATTAGCAGAATCCGATGATATCCATGACAAAGCCCAATCAGCTTTTCTTTTAACAGCTGG 408768
Query 14425 CATTGTTTCAATAGCATTAAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATC 14484
||| |||||||| ||||| ||||||| ||| | | | | | ||| || || ||
Sbjct 408769 CATAGTTTCAATGGCATTGAATAAATATTCACGTTGGTCACGATCTTTAATATAGGTGTC 408828
Query 14485 AATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAA 14544
|||||| | ||| |||||||| ||||| | || |||||||| ||||| || ||||| ||
Sbjct 408829 AATAAGAATGCTGTACATTTCCGAGTGAACATTCTCCATAGCAATCTGGAAGCCATAGAA 408888
Query 14545 ACATCTAGCTTCTGACCATTGTACCTCT-GAGTAAAATCTTTCGGCCAAATTTTCATTAA 14603
|| | ||||| | ||| |||||| ||| ||||||| ||| | | ||| |||||||
Sbjct 408889 GCAGCGGGCTTCAGTTACTTGCACCTCTTGAG-AAAATCTCTCGACAAGATTCTCATTAA 408947
Query 14604 CTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCAT 14663
|||| ||||| || ||||| || ||||| | | ||| || ||| || |||||
Sbjct 408948 CTATGCCATCGGAGGCAGCAAAGAAAGCCAACACATGGGAAATGAAATAT--CT-TTCAT 409004
Query 14664 TG---CTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCC 14720
|| ||||||| | ||| || | | ||| ||||| ||||| ||||| ||||| ||||
Sbjct 409005 TGTCTGTGAGTTTCTCCCAGTCAGACATATCTTTAGACAGATCCACTTCCTCAACAGTCC 409064
Query 14721 AAAA 14724
||||
Sbjct 409065 AAAA 409068
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482272994928560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |