Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31]
12,042 sequences; 971,188,624 total letters
Query= NC_003094.2
Length=130759
Score E
Sequences producing significant alignments: (Bits) Value
seq1431 105 6e-18
>seq1431
Length=173026
Score = 105 bits (116), Expect = 6e-18
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891
|||||||| ||||| ||||| ||||| ||||| || || || | || || || ||
Sbjct 151094 ATGCAGATTTTTGTCAAAACTTTAACGGGCAAGACCATTACGCTTGAAGTTGAGCCGTCT 151153
Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951
|| | |||||| ||| |||| || ||| | ||||| || | || ||| ||
Sbjct 151154 GATACAATAGAAAATGTAAAGGCCAAGATTCAGGACAAAGAGGGAATTCCACCTGATCAA 151213
Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGAT--TCCATGACTATGAACGATTACA 25009
||||||||||||| ||| || ||||| || |||||| || ||| | || ||||
Sbjct 151214 CAACGTTTAATATTTGCCGGAAAACAGCTTGAAGATGGTCGTACGTTATCA--GACTACA 151271
Query 25010 GCATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGG 25058
|||||| || || | |||||||||||||| || |||||||| || ||
Sbjct 151272 ACATACAAAAGGAATCAACGCTTCATTTAGTTTTGCGATTGCGTGGTGG 151320
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 418242608920640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |