Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31] 12,042 sequences; 971,188,624 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq1431 105 6e-18 >seq1431 Length=173026 Score = 105 bits (116), Expect = 6e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| ||||| ||||| ||||| ||||| || || || | || || || || Sbjct 151094 ATGCAGATTTTTGTCAAAACTTTAACGGGCAAGACCATTACGCTTGAAGTTGAGCCGTCT 151153 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 || | |||||| ||| |||| || ||| | ||||| || | || ||| || Sbjct 151154 GATACAATAGAAAATGTAAAGGCCAAGATTCAGGACAAAGAGGGAATTCCACCTGATCAA 151213 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGAT--TCCATGACTATGAACGATTACA 25009 ||||||||||||| ||| || ||||| || |||||| || ||| | || |||| Sbjct 151214 CAACGTTTAATATTTGCCGGAAAACAGCTTGAAGATGGTCGTACGTTATCA--GACTACA 151271 Query 25010 GCATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGG 25058 |||||| || || | |||||||||||||| || |||||||| || || Sbjct 151272 ACATACAAAAGGAATCAACGCTTCATTTAGTTTTGCGATTGCGTGGTGG 151320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418242608920640