Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31] 12,042 sequences; 971,188,624 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq326 134 1e-26 >seq326 Length=702362 Score = 134 bits (148), Expect = 1e-26 Identities = 299/449 (67%), Gaps = 0/449 (0%) Strand=Plus/Minus Query 20928 GGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGG 20987 || ||||||||||| || || || ||||| || ||||| ||||| ||||| || || || Sbjct 510173 GGTTCAACGTGGTTCTTATATACATGGGCATCGCCCAATGTGTGTACAAAATCACCAGGC 510114 Query 20988 GTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAAC 21047 | ||||| || | ||| || |||| ||| |||| | ||| || ||| ||||| || Sbjct 510113 TTTAGGCCAGTTATGTGGGCAATCATATAGGTCAACAAGGCATATGAGGCAATGTTGAAT 510054 Query 21048 GGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGA 21107 || || || | |||||||||||| | || || | || || || ||||| || Sbjct 510053 GGTACTCCTAAGCCCATGTCGGCACTGCGTTGATATAATTGACAAGATAGCTCACCATTG 509994 Query 21108 GCCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCG 21167 || || |||||||| ||| ||||| ||||| | ||||||| ||| | |||| | Sbjct 509993 GCAACATAAAACTGGGCCAAGCAATGACAGGGAGGCAAAGCCATCTGCGGCATGTCCATG 509934 Query 21168 GGGTTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATTAGATCCACC 21227 || ||||| ||| |||| | ||| || | || | ||| || ||| || | Sbjct 509933 GGATTCCAAGCGGACATCATGATACGTCTGTCATCGGGATTAGTGCGTATTGTATGAATA 509874 Query 21228 ACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCC 21287 || | || |||||||| |||| || ||||| ||| | | ||||| Sbjct 509873 ACCTGTTTTAGTTGGTCCACACCCTCGTTGTCATAGTTATCGTGGCAAGTTCGGTACTTA 509814 Query 21288 GCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTCC 21347 || |||||||| | |||||| || || || || || |||| ||| || || || ||| Sbjct 509813 GCTCCAAAATGACGCCACTGAAAACCATATACAGGACCCAAATCACCTTCCTCTCGATCC 509754 Query 21348 CCGAAGCCCTGCGCCGCCAAAAAGGCGCG 21376 ||| || || |||||||| |||| Sbjct 509753 GTGAAACCGAGCTTATCCAAAAAGTCGCG 509725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427713218792160