Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31]
12,042 sequences; 971,188,624 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq1094 122 7e-23
seq404 84.2 2e-11
>seq1094
Length=241507
Score = 122 bits (134), Expect = 7e-23
Identities = 156/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
||||||| ||||| || ||||||||||| ||||||||||| | || ||| | |||
Sbjct 166070 AGTACCAAATGCAAAGTCGACTCCTTTTGAATGTTGTAGTCTGACAAGGTGCGACCATCC 166129
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|||||||||||||| ||| | || | || ||||| || || | || ||||||||
Sbjct 166130 TCCAATTGTTTGCCAGCAAAGATCAAACGTTGTTGATCTGGTGGGATACCTTCTTTGTCT 166189
Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903
|||| ||| || | | | ||||||| ||||| |||| ||| ||||||
Sbjct 166190 TGGATTTTAGCCTTGACATTTTCAATAGTGTCGGAAGGCTCTACCTCCAAGGTAATGGTT 166249
Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938
|| ||||| || || |||||||| |||||||||||
Sbjct 166250 TTACCGGTTAGGGTCTTGACAAAGATCTGCATTTT 166284
>seq404
Length=684826
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| || || || | || || | ||| || || |||||||| || ||||||||||||| |
Sbjct 507030 CCACCACGGAGACGCAAAACTAAATGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAC 506971
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| || | || ||||| || ||||| || |||| | ||||||||||| ||
Sbjct 506970 AGTGTACGACCATCTTCCAACTGCTTGCCGGCGAAAATCAAACGCTGTTGGTCTGGGGGA 506911
Query 16829 ACGCCCTCTTTGTCGGCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| ||| || ||||| || || ||| ||||| | | | ||||| |||||
Sbjct 506910 ATGCCTTCCTTGTCTTGAATCTTGGCT--TTCACGTTTTCGATGGTGTCCGAAGGCTCGA 506853
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||| | |||||||||||| || |||| || ||||| || || |||||
Sbjct 506852 CTTCGAGGGTGATGGTTTTGCCAGTCAAGGTCTTGACGAAGATTTGCAT 506804
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405028548525580
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |