Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31] 12,042 sequences; 971,188,624 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq435 98.7 2e-17 >seq435 Length=568824 Score = 98.7 bits (108), Expect = 2e-17 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 3334 CCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCG 3393 |||||| || |||||||| | | |||| |||||| || |||||||| |||||||| Sbjct 266588 CCCATGGCCCGGGTCTTTCCCAAAGTCACCAAATGTACATTCCACAAATATGGTCCTTCC 266529 Query 3394 GGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAG 3453 ||||| || | || | ||| || ||||| | || ||| ||| | ||||| ||||| Sbjct 266528 GGCTCGGTGCAGAAGTTCGATGGTCTCTGTGTGCTGCCGTTGAATATTGTCAATGAGAAA 266469 Query 3454 ATCTACATTTTCCTCTGGTTCTGGTTC 3480 ||||| | ||||| |||||||||||| Sbjct 266468 ATCTATGTCTTCCTATGGTTCTGGTTC 266442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12478356267000