Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31] 12,042 sequences; 971,188,624 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq404 82.4 6e-11 >seq404 Length=684826 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || || || |||| ||| || || || || |||||||| || || | |||| || Sbjct 506793 AGACGTAGGACCAAATGTAGTGTAGATTCTTTTTGAATGTTATAGTCGGACAATGTACGT 506734 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 |||| |||||||||||||| || || |||| ||||| ||||| || | | ||| Sbjct 506733 CCGTCTTCCAATTGCTTGCCAGCGAAAATCAAACGCTGTTGATCTGGGGGAATACCTTCT 506674 Query 34030 TTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCATTCGACCGTT 34089 ||||| |||||| ||||| | | |||||| || ||| ||| | || Sbjct 506673 TTGTCTTGAATTTTGGCCTTAACATTTTCTATAGTATCAGAAGGTTCAACTTCCAGTGTG 506614 Query 34090 ATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 || |||||||| |||| ||| || || || |||||||| Sbjct 506613 ATAGTTTTTCCCGTTAATGTCTTAACGAATATTTGCAT 506576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397004126377684