Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31]
12,042 sequences; 971,188,624 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq540 120 4e-22
>seq540
Length=484570
Score = 120 bits (132), Expect = 4e-22
Identities = 286/425 (67%), Gaps = 8/425 (2%)
Strand=Plus/Plus
Query 171726 AACCTGTGCCAATACCTTCGGTGCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGA 171785
||||||| || ||||| |||| || || || | ||||| |||| ||||||||||
Sbjct 95577 AACCTGTACCGATACCATCGGCTCCATTTACCAAGACCATAGGAATAATTGGCATATACC 95636
Query 171786 AGTCTGGTTCAATCGCACGCCCATCATCATCCAAATAGTTGAGCACGGGGTCGTCCCTCG 171845
| |||||||||| | |||||||| | || | | || ||| || ||| |
Sbjct 95637 AAACTGGTTCAATTTTTTGACCATCATCGACTTCGTACTGCAACAAGGGATCATCCGAGG 95696
Query 171846 GATCAAAGATTTTACGAGCATCCTTGGTGAGTT--TTGTGAAGATGTACCTCGTTTGAGA 171903
||| ||| || |||| || | || || | |||| |||||||| | | ||
Sbjct 95697 GATGAAAAATCATACGGGC--CAAAGGAGACATAATTGTAAAGATGTAACGAGCACTAG- 95753
Query 171904 CGCA-TCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACACGGTTCAAGGAGATTGA 171962
|||| || |||||||| | | | || || || ||||| | || || || || ||||
Sbjct 95754 CGCAATCCTTGCCACCAGTCAACCTAGTACCGAACTGACCTCTGGGCTCCAGCAGGTTGA 95813
Query 171963 TATTGTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGT-ATCCGCGAGGGAGACT 172021
||||||| || |||| |||| | |||||| || ||||| || || || || || |||
Sbjct 95814 TATTGTTCGAGCCCACATAGTTTTGGGCCAAATTAACAATTGTCATTTGC-AGTGAAACT 95872
Query 172022 TCACCGTGATGGTAGGCCGACTTGTCCGCGACATACGCCGCCAACTGTGCCACCTTCATC 172081
||||||||||||||||| ||| | || | || | | | | || || ||||||| |
Sbjct 95873 TCACCGTGATGGTAGGCGGACATTTCAGATACGGAACCAGAGAGTTGGGCTACCTTCACC 95932
Query 172082 TCATCCTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGTGAAGGCTTGAGG 172141
||| |||| || | |||||| | | |||| ||||| | || |||||||| |
Sbjct 95933 TCACGCTTGTCATTACGCTTGAAGCAGGTAAACATCACCTTACGTTGGCCAGGCTTGAAG 95992
Query 172142 CCGTC 172146
|| ||
Sbjct 95993 CCATC 95997
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597263683349360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |