Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31] 12,042 sequences; 971,188,624 total letters Query= NC_011588.1 Length=127615 Score E Sequences producing significant alignments: (Bits) Value seq1793 82.4 6e-11 >seq1793 Length=142535 Score = 82.4 bits (90), Expect = 6e-11 Identities = 106/143 (74%), Gaps = 4/143 (3%) Strand=Plus/Minus Query 69594 ATTTATTCGAGAGTCGCTCGTGTCTGCAAAAATGATCACGGCGGC--CCACATCGGTACT 69651 |||||||| | | |||||||| || |||||||||| || || ||| ||| | | Sbjct 66133 ATTTATTCCCGCATTGCTCGTGTTTGTAAAAATGATCCTGGTGGTGACCAAATCT-TGCG 66075 Query 69652 CGGATAAATGGACGTCATTTTTAAAGACTCGACTAAATTGTTCGGTGCCCGGCGAATTCC 69711 || |||| ||||| |||||||| || | || ||||||||||| |||| || || | | Sbjct 66074 CG-ATAATTGGACTTCATTTTTGAAAGCGCGCCTAAATTGTTCCCTGCCGGGAGAGTATC 66016 Query 69712 CCTTTTACTTTGACGAATTGCAG 69734 | ||||||||||| ||| | ||| Sbjct 66015 CTTTTTACTTTGATGAAATTCAG 65993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408183285462512