Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31]
12,042 sequences; 971,188,624 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq305 95.1 2e-14
>seq305
Length=710094
Score = 95.1 bits (104), Expect = 2e-14
Identities = 155/220 (70%), Gaps = 5/220 (2%)
Strand=Plus/Plus
Query 160216 GTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTC 160275
||||||||| | ||| ||||| || || || ||||| ||| ||||| | | | ||
Sbjct 408841 GTACATTTCCGAGTGAACATTCTCCATAGCAATCTGGAAGCCATAGAAGCA-GCGGGCTT 408899
Query 160276 CAGATACT-GCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGG 160334
||| |||| ||||||| || | || || | | ||||| ||||||| | || ||||
Sbjct 408900 CAGTTACTTGCACCTCTTGAGAAAATCTCTCGACAAGATTCTCATTAACTATGCCATCGG 408959
Query 160335 CGGCCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCT 160394
||| ||||||||||||||||| || || ||||||| ||| || | | ||||| |
Sbjct 408960 AGGCAGCAAAGAAAGCCAACACATGGGAAATGAAATATCTTTCATTGTCTGTGAGT---T 409016
Query 160395 TTTCCCAGTGTGTCACGTCTTGGGCCAAATCAACCTCTTC 160434
| ||||||| | || |||| | || ||| || || ||
Sbjct 409017 TCTCCCAGTCAGACATATCTTTAGACAGATCCACTTCCTC 409056
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795035509263520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |