Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31] 12,042 sequences; 971,188,624 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq305 95.1 2e-14 >seq305 Length=710094 Score = 95.1 bits (104), Expect = 2e-14 Identities = 155/220 (70%), Gaps = 5/220 (2%) Strand=Plus/Plus Query 160216 GTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTC 160275 ||||||||| | ||| ||||| || || || ||||| ||| ||||| | | | || Sbjct 408841 GTACATTTCCGAGTGAACATTCTCCATAGCAATCTGGAAGCCATAGAAGCA-GCGGGCTT 408899 Query 160276 CAGATACT-GCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGG 160334 ||| |||| ||||||| || | || || | | ||||| ||||||| | || |||| Sbjct 408900 CAGTTACTTGCACCTCTTGAGAAAATCTCTCGACAAGATTCTCATTAACTATGCCATCGG 408959 Query 160335 CGGCCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCT 160394 ||| ||||||||||||||||| || || ||||||| ||| || | | ||||| | Sbjct 408960 AGGCAGCAAAGAAAGCCAACACATGGGAAATGAAATATCTTTCATTGTCTGTGAGT---T 409016 Query 160395 TTTCCCAGTGTGTCACGTCTTGGGCCAAATCAACCTCTTC 160434 | ||||||| | || |||| | || ||| || || || Sbjct 409017 TCTCCCAGTCAGACATATCTTTAGACAGATCCACTTCCTC 409056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795035509263520