Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31]
12,042 sequences; 971,188,624 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq540 109 6e-19
>seq540
Length=484570
Score = 109 bits (120), Expect = 6e-19
Identities = 284/428 (66%), Gaps = 4/428 (1%)
Strand=Plus/Plus
Query 167357 AACCCGTACCAATACCTTCAGTACCGTTTACCAAAACCATCGGTAGAGTTGGCATGTAAA 167416
|||| ||||| ||||| || | || |||||||| ||||| || | | ||||||| ||
Sbjct 95577 AACCTGTACCGATACCATCGGCTCCATTTACCAAGACCATAGGAATAATTGGCATATACC 95636
Query 167417 AGTCGGGTTCAATGGAACGACCATCATCATCCAAGTAGTTGAGAATGGCATCATCTTTGG 167476
| | |||||||| |||||||||| | ||| | | | || |||||| ||
Sbjct 95637 AAACTGGTTCAATTTTTTGACCATCATCGACTTCGTACTGCAACAAGGGATCATCCGAGG 95696
Query 167477 GATCGAAGAGCTTTCGAGCCTCCTTGGTAAGCTTCGTAAAGATGTACCTCGTCTGAGACG 167536
||| || | | | || ||| | | | ||||||||||| | | || ||
Sbjct 95697 GATGAAAAATCATACGGGCCAAAGGAGACATAATTGTAAAGATGTAACGAGCACTAG-CG 95755
Query 167537 CA-TCCTTGCCACCCATGAGGCGTGTACCAAATTGACCACATGGCTCGAGAAGATTGATG 167595
|| ||||||||||| | | | ||||| || ||||| | ||||| || || |||||
Sbjct 95756 CAATCCTTGCCACCAGTCAACCTAGTACCGAACTGACCTCTGGGCTCCAGCAGGTTGATA 95815
Query 167596 TTATTCGACCCCGTATAATCGTTGGCCAACTTGACGATCGT-TTCAGCGAGGGAAACTTC 167654
|| ||||| ||| ||| | | |||||| || || || || | || || ||||||||
Sbjct 95816 TTGTTCGAGCCCACATAGTTTTGGGCCAAATTAACAATTGTCATTTGC-AGTGAAACTTC 95874
Query 167655 GCCGTGGTGGTAAGCACTCTTTTCAGCCACATATGCTGCCAACTGTGCAACCTTCATCTC 167714
||||| ||||| || | |||||| || | | | | || || ||||||| |||
Sbjct 95875 ACCGTGATGGTAGGCGGACATTTCAGATACGGAACCAGAGAGTTGGGCTACCTTCACCTC 95934
Query 167715 ATCTTTGAGATTCTTTTGGAAACATGAATACATAACCTTGCGTTGAGAAGGTTTGAGACC 167774
| ||| ||| | ||| || | | |||| ||||| ||||| ||| |||| ||
Sbjct 95935 ACGCTTGTCATTACGCTTGAAGCAGGTAAACATCACCTTACGTTGGCCAGGCTTGAAGCC 95994
Query 167775 ATCTGCCA 167782
|||| |||
Sbjct 95995 ATCTACCA 96002
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588887344387600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |