Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31] 12,042 sequences; 971,188,624 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq540 109 6e-19 >seq540 Length=484570 Score = 109 bits (120), Expect = 6e-19 Identities = 284/428 (66%), Gaps = 4/428 (1%) Strand=Plus/Plus Query 167357 AACCCGTACCAATACCTTCAGTACCGTTTACCAAAACCATCGGTAGAGTTGGCATGTAAA 167416 |||| ||||| ||||| || | || |||||||| ||||| || | | ||||||| || Sbjct 95577 AACCTGTACCGATACCATCGGCTCCATTTACCAAGACCATAGGAATAATTGGCATATACC 95636 Query 167417 AGTCGGGTTCAATGGAACGACCATCATCATCCAAGTAGTTGAGAATGGCATCATCTTTGG 167476 | | |||||||| |||||||||| | ||| | | | || |||||| || Sbjct 95637 AAACTGGTTCAATTTTTTGACCATCATCGACTTCGTACTGCAACAAGGGATCATCCGAGG 95696 Query 167477 GATCGAAGAGCTTTCGAGCCTCCTTGGTAAGCTTCGTAAAGATGTACCTCGTCTGAGACG 167536 ||| || | | | || ||| | | | ||||||||||| | | || || Sbjct 95697 GATGAAAAATCATACGGGCCAAAGGAGACATAATTGTAAAGATGTAACGAGCACTAG-CG 95755 Query 167537 CA-TCCTTGCCACCCATGAGGCGTGTACCAAATTGACCACATGGCTCGAGAAGATTGATG 167595 || ||||||||||| | | | ||||| || ||||| | ||||| || || ||||| Sbjct 95756 CAATCCTTGCCACCAGTCAACCTAGTACCGAACTGACCTCTGGGCTCCAGCAGGTTGATA 95815 Query 167596 TTATTCGACCCCGTATAATCGTTGGCCAACTTGACGATCGT-TTCAGCGAGGGAAACTTC 167654 || ||||| ||| ||| | | |||||| || || || || | || || |||||||| Sbjct 95816 TTGTTCGAGCCCACATAGTTTTGGGCCAAATTAACAATTGTCATTTGC-AGTGAAACTTC 95874 Query 167655 GCCGTGGTGGTAAGCACTCTTTTCAGCCACATATGCTGCCAACTGTGCAACCTTCATCTC 167714 ||||| ||||| || | |||||| || | | | | || || ||||||| ||| Sbjct 95875 ACCGTGATGGTAGGCGGACATTTCAGATACGGAACCAGAGAGTTGGGCTACCTTCACCTC 95934 Query 167715 ATCTTTGAGATTCTTTTGGAAACATGAATACATAACCTTGCGTTGAGAAGGTTTGAGACC 167774 | ||| ||| | ||| || | | |||| ||||| ||||| ||| |||| || Sbjct 95935 ACGCTTGTCATTACGCTTGAAGCAGGTAAACATCACCTTACGTTGGCCAGGCTTGAAGCC 95994 Query 167775 ATCTGCCA 167782 |||| ||| Sbjct 95995 ATCTACCA 96002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588887344387600