Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31]
12,042 sequences; 971,188,624 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq51 104 3e-17
>seq51
Length=1541544
Score = 104 bits (114), Expect = 3e-17
Identities = 175/246 (71%), Gaps = 8/246 (3%)
Strand=Plus/Plus
Query 154863 CTGTCATGTATTATGATTACATACCCATCTACACATGG-TGTATTTGAAACTAACATTAG 154921
|| || ||| ||||||| || || || || || ||||| ||||||||| | || | |
Sbjct 1105646 CTATCGTGTCTTATGATCACCTATCCCTCAAC-CATGGGTGTATTTGAG-CAGACTGTGG 1105703
Query 154922 ACAGATATGTAAGATCGTTCATGACAA---TGGTGGTCAGGTATATCTTGATGGAGCAAA 154978
| || || | |||| || |||| ||||||||| || ||||| ||||| || ||
Sbjct 1105704 CC-GACATTTGTGATC-TTATCCACAAATTTGGTGGTCAAGTTTATCTGGATGGTGCCAA 1105761
Query 154979 TCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCT 155038
| | ||||| ||||| || ||| || |||| || || ||||| | ||| |
Sbjct 1105762 TATGAATGCCCAGGTGGGCCTATGTCGTCCTGGTGATTACGGCAGTGATGTGTCCCATTT 1105821
Query 155039 AAACTTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTAT 155098
|| | || ||||| ||||||||||| ||||| ||||| ||||||||| | ||||| ||
Sbjct 1105822 GAATCTTCACAAAACCTTCTGTATTCCCCATGGCGGTGGTGGTCCTGGCATGGGTCCCAT 1105881
Query 155099 AGGTGT 155104
||||||
Sbjct 1105882 AGGTGT 1105887
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579125613993280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |