Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31] 12,042 sequences; 971,188,624 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq51 104 3e-17 >seq51 Length=1541544 Score = 104 bits (114), Expect = 3e-17 Identities = 175/246 (71%), Gaps = 8/246 (3%) Strand=Plus/Plus Query 154863 CTGTCATGTATTATGATTACATACCCATCTACACATGG-TGTATTTGAAACTAACATTAG 154921 || || ||| ||||||| || || || || || ||||| ||||||||| | || | | Sbjct 1105646 CTATCGTGTCTTATGATCACCTATCCCTCAAC-CATGGGTGTATTTGAG-CAGACTGTGG 1105703 Query 154922 ACAGATATGTAAGATCGTTCATGACAA---TGGTGGTCAGGTATATCTTGATGGAGCAAA 154978 | || || | |||| || |||| ||||||||| || ||||| ||||| || || Sbjct 1105704 CC-GACATTTGTGATC-TTATCCACAAATTTGGTGGTCAAGTTTATCTGGATGGTGCCAA 1105761 Query 154979 TCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCT 155038 | | ||||| ||||| || ||| || |||| || || ||||| | ||| | Sbjct 1105762 TATGAATGCCCAGGTGGGCCTATGTCGTCCTGGTGATTACGGCAGTGATGTGTCCCATTT 1105821 Query 155039 AAACTTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTAT 155098 || | || ||||| ||||||||||| ||||| ||||| ||||||||| | ||||| || Sbjct 1105822 GAATCTTCACAAAACCTTCTGTATTCCCCATGGCGGTGGTGGTCCTGGCATGGGTCCCAT 1105881 Query 155099 AGGTGT 155104 |||||| Sbjct 1105882 AGGTGT 1105887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579125613993280