Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31]
12,042 sequences; 971,188,624 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq51 111 2e-19
>seq51
Length=1541544
Score = 111 bits (122), Expect = 2e-19
Identities = 339/514 (66%), Gaps = 10/514 (2%)
Strand=Plus/Plus
Query 159271 TGTGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAG 159330
||||| || || || | ||| || ||||| || || || ||||| | ||||||||
Sbjct 1105379 TGTGAGATTACCGGTTATGACAAAATCTCATTCCAGCCCAATTCAGGAGCTCAGGGTGAA 1105438
Query 159331 TATGCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGA-GATGATAAAAGAAA 159389
||||| || || ||| || | | || ||| || ||| | || | | || |
Sbjct 1105439 TATGCTGGTCTTAGAGCCATTCGCTCTTATCATGAAC-ATCGTAACGAAGGCCATCGACA 1105497
Query 159390 TGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGG 159449
| | ||| | || || || || ||||| || ||||| ||||| || ||||| ||
Sbjct 1105498 TATTTGTCTCATTCCCATATCTGCTCATGGCACAAATCCGGCATCTGCCCAAATGGCGGG 1105557
Query 159450 GATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGCAACATAGACATCAAAGATCTAGA 159509
|||||||||| | | || | ||||||| ||||||||| ||||
Sbjct 1105558 CATGAAAGTTGAACCCATTAAAATTCTCTCCGATGGCAGCATAGACATGGCTCATCTGAG 1105617
Query 159510 GAAGAAAGCAATCATGA--ATACATTTGAACTGTCATGTATTATGATTACATATCCATCT 159567
| | ||||| | | || || | | || || ||| ||||||| || ||||| ||
Sbjct 1105618 GGACAAAGC--TGAGGAGCATGCCAAAAATCTATCGTGTCTTATGATCACCTATCCCTCA 1105675
Query 159568 ACACATGG-TGTATTTGAAACAAACATCAGAC-AGATATGTAAGATTGTTCATGAGAATG 159625
|| ||||| ||||||||| || || | | | || ||| | || | || | ||
Sbjct 1105676 AC-CATGGGTGTATTTGAG-CAGACTGTGGCCGACATTTGTGATCTTATCCACAAATTTG 1105733
Query 159626 GTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCAT 159685
||||||| || ||||| |||||||| ||| | ||||| ||||| || ||| ||
Sbjct 1105734 GTGGTCAAGTTTATCTGGATGGTGCCAATATGAATGCCCAGGTGGGCCTATGTCGTCCTG 1105793
Query 159686 GTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATG 159745
|||| || || ||||| | ||| | || | || || || ||||||||||| ||||
Sbjct 1105794 GTGATTACGGCAGTGATGTGTCCCATTTGAATCTTCACAAAACCTTCTGTATTCCCCATG 1105853
Query 159746 GAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779
| ||||| ||||||||| | ||||| || |||||
Sbjct 1105854 GCGGTGGTGGTCCTGGCATGGGTCCCATAGGTGT 1105887
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 587962683593120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |