Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31]
12,042 sequences; 971,188,624 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq404 152 1e-31
seq1094 113 1e-19
>seq404
Length=684826
Score = 152 bits (168), Expect = 1e-31
Identities = 152/197 (77%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003
|| || |||||||||||||||||||| | | |||| ||| ||||| |||||||| ||
Sbjct 506544 GTAGATTCTTTTTGAATATTGTAATCAGACAATGTTCGCCCGTCTTCAAGCTGCTTGCCA 506485
Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063
||||| || | ||| ||||||||||| || || |||||||||||||||||||| ||
Sbjct 506484 GCGAAAATCAATCGCTGTTGGTCTGGTGGGATTCCTTCTTTGTCTTGAATTTTGGCTTTA 506425
Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123
|| || |||||||| || ||| || || || | ||| | || || || ||||| |||
Sbjct 506424 ACATTTTCAATGGTATCAGAAGGCTCAACCTCCAAGGTGATGGTTTTACCAGTCAATGTT 506365
Query 195124 TTTACGAACACTTGCAT 195140
||||| || | ||||||
Sbjct 506364 TTTACAAAGATTTGCAT 506348
Score = 152 bits (168), Expect = 1e-31
Identities = 165/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981
||| | |||||| | || || || ||||| || || || ||||| |||| || || |
Sbjct 507022 GAGACGCAAAACTAAATGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGACAGTGTACG 506963
Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041
|||||||| | |||||| || ||||| || | || ||||||||||| |||||||||||
Sbjct 506962 ACCATCTTCCAACTGCTTGCCGGCGAAAATCAAACGCTGTTGGTCTGGGGGAATGCCTTC 506903
Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101
||||||||||| || || ||||| || |||||||||||| || ||||| |||||
Sbjct 506902 CTTGTCTTGAATCTTGGCTTTCACGTTTTCGATGGTGTCCGAAGGCTCGACTTCGAGGGT 506843
Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| || || || ||||| || || ||||| | ||||||
Sbjct 506842 GATGGTTTTGCCAGTCAAGGTCTTGACGAAGATTTGCAT 506804
Score = 136 bits (150), Expect = 9e-27
Identities = 154/204 (75%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCTG 194996
||||| || || || ||||| ||||| ||||||| |||| || | |||||||| |||||
Sbjct 506322 TGAAGTGTAGATTCCTTTTGGATATTATAATCGGACAAG-GTACGTCCATCTTCCAGCTG 506264
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||||| || ||||| | |||||||| |||||||||||||||||||| |||||||| ||
Sbjct 506263 TTTACCGGCAAAGATCAAACGTTGTTGATCTGGAGGAATGCCTTCTTTATCTTGAATCTT 506204
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
|| || || |||||||| || || ||| || || | || | ||||| || ||
Sbjct 506203 GGCTTTAACATTTTCAATGGTATCAGAGGGTTCAACCTCCAATGTGATGGTCTTGCCAGT 506144
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
|| || || ||||| | |||||
Sbjct 506143 TAATGTCTTCACGAAGATCTGCAT 506120
Score = 136 bits (150), Expect = 9e-27
Identities = 152/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
|| || || || || || || || ||||| || | | || | |||||||| | |||
Sbjct 509440 TGGAGTGTTGATTCCTTCTGGATGTTGTAGTCCGACAATGTGCGACCATCTTCCAACTGT 509381
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
|| || || ||||| | ||||| || ||||| |||||||||||||| |||||||||||
Sbjct 509380 TTGCCGGCAAAGATCAAACGTTGCTGATCTGGGGGAATGCCTTCTTTATCTTGAATTTTG 509321
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117
|||||| || || ||||| || || ||||||||| | |||| |||||||| |||
Sbjct 509320 GCCTTGACATTTTCTATGGTATCAGAGGGTTCCACTTCCAACGTAATTGTCTTTCCAGTC 509261
Query 195118 AAAGTTTTTACGAACACTTGCAT 195140
||||| || ||||| | ||||||
Sbjct 509260 AAAGTCTTGACGAAAATTTGCAT 509238
Score = 129 bits (142), Expect = 1e-24
Identities = 151/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || || || ||||| || ||||| ||||| | | || | |||||||| | |||
Sbjct 508985 GTGGAGGGTCGATTCTTTCTGGATATTATAATCTGACAATGTACGACCATCTTCCAACTG 508926
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||||| |||||||| | ||||| || ||||| ||||| ||||| ||||||||||| ||
Sbjct 508925 TTTACCAGCGAAGATCAAACGTTGCTGATCTGGGGGAATACCTTCCTTGTCTTGAATCTT 508866
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
|||||||| |||||||| || || ||| ||||| | || | || ||||| ||
Sbjct 508865 AGCTTTGACGTTTTCAATGGTATCGGATGGTTCGACTTCTAAAGTGATGGTTTTTCCAGT 508806
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
|| || || ||||| | ||||||
Sbjct 508805 CAGGGTCTTGACGAAGATTTGCAT 508782
Score = 127 bits (140), Expect = 5e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
|| || || || ||||| || || ||||| || | | ||| | |||||||| | |||
Sbjct 509212 TGGAGGGTAGATTCTTTCTGGATGTTGTAGTCTGACAAAGTGCGACCATCTTCCAATTGC 509153
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
|| || |||||||| | |||||||||||||| |||||||||||||| |||||||||||
Sbjct 509152 TTGCCGGCGAAGATTAAGCGTTGTTGGTCTGGGGGAATGCCTTCTTTATCTTGAATTTTA 509093
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117
|| || || || || || || || ||| ||||| | || | || |||||||||
Sbjct 509092 GCTTTCACATTTTCGATAGTATCGGATGGTTCGACTTCTAATGTGATGGTTTTTCCTGTC 509033
Query 195118 AAAGTTTTTACGAACACTTGCAT 195140
| || || ||||| | ||||||
Sbjct 509032 AGGGTCTTGACGAAGATTTGCAT 509010
Score = 123 bits (136), Expect = 6e-23
Identities = 149/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
|| || || || ||||||||||| || || |||| | || | || ||||| | |||
Sbjct 506778 TGTAGTGTAGATTCTTTTTGAATGTTATAGTCGGACAATGTACGTCCGTCTTCCAATTGC 506719
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
|| || ||||| || | || ||||| ||||| ||||| ||||||||||||||||||||
Sbjct 506718 TTGCCAGCGAAAATCAAACGCTGTTGATCTGGGGGAATACCTTCTTTGTCTTGAATTTTG 506659
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117
||| || || || || || || ||| ||| ||||| || || | || ||||| ||
Sbjct 506658 GCCTTAACATTTTCTATAGTATCAGAAGGTTCAACTTCCAGTGTGATAGTTTTTCCCGTT 506599
Query 195118 AAAGTTTTTACGAACACTTGCAT 195140
|| || || ||||| | ||||||
Sbjct 506598 AATGTCTTAACGAATATTTGCAT 506576
>seq1094
Length=241507
Score = 113 bits (124), Expect = 1e-19
Identities = 147/201 (73%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 194943 AGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCTGCTTAC 195001
||| ||||| |||||||| ||||| || | |||| || | ||||| || | || || |
Sbjct 166084 AGTCGACTCCTTTTGAATGTTGTAGTCTGACAAG-GTGCGACCATCCTCCAATTGTTTGC 166142
Query 195002 CTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCT 195061
| || ||||| | |||||||| ||||| || || |||||||||||||| ||||| ||
Sbjct 166143 CAGCAAAGATCAAACGTTGTTGATCTGGTGGGATACCTTCTTTGTCTTGGATTTTAGCCT 166202
Query 195062 TGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAG 195121
|||| || ||||| ||||| ||| || || || | ||||| || || || || | |
Sbjct 166203 TGACATTTTCAATAGTGTCGGAAGGCTCTACCTCCAAGGTAATGGTTTTACCGGTTAGGG 166262
Query 195122 TTTTTACGAACACTTGCATTT 195142
| || || || | |||||||
Sbjct 166263 TCTTGACAAAGATCTGCATTT 166283
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109310420164214
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |