Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31]
12,042 sequences; 971,188,624 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq1090 107 4e-18
>seq1090
Length=275775
Score = 107 bits (118), Expect = 4e-18
Identities = 178/257 (69%), Gaps = 0/257 (0%)
Strand=Plus/Minus
Query 221945 TAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACAC 222004
|| ||| ||||||| | |||||| | |||| | || |||||||| || ||||||
Sbjct 260436 TAAAGCTTGTCAAATTCTTCACCCCAGACCTCATGGAGTCCTGGACATTTGTGAGGACAC 260377
Query 222005 ATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGC 222064
|| || ||| | ||| |||| || | |||| || | || || ||||| ||
Sbjct 260376 ATTAGGGACCAATCGCCGTTTTCTTCCACACGTCGCATAAACAAATCTGGTATCCAAAGA 260317
Query 222065 GCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAA 222124
|| | || |||||||||| || ||||| || |||| | || || | | |||||||
Sbjct 260316 GCATAGAAAAGATCTCTGGCACGATGCTCTTCTTTGCCGGTATTCTTTTTTAAATCCAAA 260257
Query 222125 AACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTG 222184
|||||||| ||||| | ||||| || |||| |||| ||| | || || || || |||
Sbjct 260256 AACTCAAAGATGTCCGAATGCCAAGGTTCCAAGTAGATGGCAAATGCACCAGGACGTTTG 260197
Query 222185 TTGCCACCCTGATCCAC 222201
||||||||||| ||
Sbjct 260196 CCACCACCCTGATCAAC 260180
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928704985636480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |