Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31]
12,042 sequences; 971,188,624 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq1090 131 8e-26
>seq1090
Length=275775
Score = 131 bits (144), Expect = 8e-26
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992
|||||| |||||||| ||||| | ||||| || | |||||| || | ||||||||
Sbjct 260341 CATAAACAAATCTGGTATCCAAAGAGCATAGAAAAGATCTCTGGCACGATGCTCTTCTTT 260282
Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052
||| ||||||||||| ||| || || ||||| || || || ||||| ||||| || ||
Sbjct 260281 GCCGGTATTCTTTTTTAAATCCAAAAACTCAAAGATGTCCGAATGCCAAGGTTCCAAGTA 260222
Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112
||| ||||| ||| | ||| || ||||| ||||| ||||| | |||| | |||
Sbjct 260221 GATGGCAAATGCACCAGGACGTTTGCCACCACCCTGATCAACGTAGCGTGCAACATTATT 260162
Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGC 26159
||| ||| | ||||| || || || ||| | || ||| || ||||
Sbjct 260161 GAATACTCTTAACATGGGCACCAAACCATTGGAGGTTCCATTAGTGC 260115
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253002863375150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |