Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31]
12,042 sequences; 971,188,624 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq51 123 3e-23
>seq51
Length=1541544
Score = 123 bits (136), Expect = 3e-23
Identities = 344/516 (67%), Gaps = 14/516 (3%)
Strand=Plus/Minus
Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242
||||| || ||||| | ||||||||| ||||| ||||| ||||||||||| || || ||
Sbjct 1105887 ACACCTATGGGACCCATGCCAGGACCACCACCGCCATGGGGAATACAGAAGGTTTTGTGA 1105828
Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302
| ||| | ||| | ||||| || || |||| || ||| || ||||| |||
Sbjct 1105827 AGATTCAAATGGGACACATCACTGCCGTAATCACCAGGACGACATAGGCCCACCTGGGCA 1105768
Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCA---TTGTCATGAACGATCTTACAT 138359
|| | ||| |||||||| ||||| || ||||||||| |||| || |||| | ||
Sbjct 1105767 TTCATATTGGCACCATCCAGATAAACTTGACCACCAAATTTGTGGATAA-GATCACAAAT 1105709
Query 138360 ATCTGTCTGATGTTTGTTTCAAATACA-CCATGAGTCGATGGATATGTAATCATAATACA 138418
|| | | | || || ||||||||| ||||| || || ||||| || ||||||| |||
Sbjct 1105708 GTCGGCCACA-GTCTG-CTCAAATACACCCATG-GTTGAGGGATAGGTGATCATAAGACA 1105652
Query 138419 TGAGAGTTCAAATGTAT--TCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTG 138476
|| || | | || || | | ||||| | | |||| ||||||||| ||
Sbjct 1105651 CGATAGATTTTTGGCATGCTCCTCA--GCTTTGTCCCTCAGATGAGCCATGTCTATGCTG 1105594
Query 138477 CCATCATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGA 138536
||||| | || | | |||||||||| || ||||| ||| || |||
Sbjct 1105593 CCATCGGAGAGAATTTTAATGGGTTCAACTTTCATGCCCGCCATTTGGGCAGATGCCGGA 1105534
Query 138537 TTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATC-TCCTGATCC 138595
|| || ||||| || || || || ||||| | || || | | || | |||
Sbjct 1105533 TTTGTGCCATGAGCAGATATGGGAATGAGACAAATATGTCGATGGCCTTCGTTACGAT-G 1105475
Query 138596 TTGATGATATGCTTGGATTGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTAGG 138655
|| |||||| | | || ||| || || ||||| |||||||| | ||||| || ||
Sbjct 1105474 TTCATGATAAGAGCGAATGGCTCTAAGACCAGCATATTCACCCTGAGCTCCTGAATTGGG 1105415
Query 138656 TTGTAATGATATAGAATCAAAACCTGTGATATCACA 138691
|| ||||| || ||| |||| || || |||||
Sbjct 1105414 CTGGAATGAGATTTTGTCATAACCGGTAATCTCACA 1105379
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578911246265840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |