Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31] 12,042 sequences; 971,188,624 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq149 120 4e-22 >seq149 Length=1119921 Score = 120 bits (132), Expect = 4e-22 Identities = 202/292 (69%), Gaps = 14/292 (5%) Strand=Plus/Plus Query 47788 CCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCG 47847 |||||||| || ||| |||| || ||| |||||||||| | |||||| ||||| Sbjct 944232 CCTGTGGCTATTACATAATCGGAGGGCGTATCTCGTTGAAGCATCATCCACATGGCCTCC 944291 Query 47848 ACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAG 47907 || ||||| |||||| ||||| ||||| | ||| | ||| || | | ||| | Sbjct 944292 ACGTAATCGGCGGCATGACCCCAATCACGTTTCGAATCCAAATTACCCAATTCAAAATAC 944351 Query 47908 TC---TTGCTTACCTTCAGAGATTGCTTTT----AATGCTCTTGTAATCTTACGAGTTAC 47960 || ||| || ||| | | |||| | | | ||| || || || ||||| Sbjct 944352 TCCAATTGGTT-------GAGGTAGATTTTTGCCACAGAACGTGTGATTTTGCGTGTTAC 944404 Query 47961 AAAAGTTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACAT 48020 ||| |||| || |||| |||||||||||||| || ||||||||| | || ||| |||| Sbjct 944405 GAAATTTTCTCCGCGTCGGGGAGATTCATGATTGAAGAGAATACCATTGCAAGCAAACAT 944464 Query 48021 TCCGTATGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCA 48072 ||| | ||| ||||||||| || |||||||| ||||| | ||| ||| Sbjct 944465 GTTGTACGCTTCGCGATAGTTCACCACAATCCAGTAGCCATACATTTTGGCA 944516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665394226455440