Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31] 12,042 sequences; 971,188,624 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq329 109 7e-18 >seq329 Length=665889 Score = 109 bits (120), Expect = 7e-18 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 1592108 AAGCGCACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCACC 1592167 || ||||| |||||||| || ||||||| || || | || || || ||| Sbjct 643422 AAACGCACAGACGACATTTCCTCGTGGGATGCCGATTTCCTTAAGGTGGACCAAGGTACC 643363 Query 1592168 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGG 1592227 || || || ||||| | |||||||| || || ||||||||| || |||||| | Sbjct 643362 CTATTCGAATTGATTTTAGCCGCCAATTATCTGGACATCAAGGGCCTCCTCGATGTCACA 643303 Query 1592228 TGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTT 1592287 ||||| | || |||||||||||||| ||||| | ||||||||||| |||||||| ||| Sbjct 643302 TGCAAAACAGTAGCCAACATGATCAAAGGCAAAACACCCGAGGAGATACGCAAGACATTT 643243 Query 1592288 AACATCAA 1592295 || ||||| Sbjct 643242 AATATCAA 643235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106150977087314