Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31]
12,042 sequences; 971,188,624 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq329 109 7e-18
>seq329
Length=665889
Score = 109 bits (120), Expect = 7e-18
Identities = 137/188 (73%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 1592108 AAGCGCACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCACC 1592167
|| ||||| |||||||| || ||||||| || || | || || || |||
Sbjct 643422 AAACGCACAGACGACATTTCCTCGTGGGATGCCGATTTCCTTAAGGTGGACCAAGGTACC 643363
Query 1592168 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGG 1592227
|| || || ||||| | |||||||| || || ||||||||| || |||||| |
Sbjct 643362 CTATTCGAATTGATTTTAGCCGCCAATTATCTGGACATCAAGGGCCTCCTCGATGTCACA 643303
Query 1592228 TGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTT 1592287
||||| | || |||||||||||||| ||||| | ||||||||||| |||||||| |||
Sbjct 643302 TGCAAAACAGTAGCCAACATGATCAAAGGCAAAACACCCGAGGAGATACGCAAGACATTT 643243
Query 1592288 AACATCAA 1592295
|| |||||
Sbjct 643242 AATATCAA 643235
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6106150977087314
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |