Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31] 12,042 sequences; 971,188,624 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq329 127 3e-23 >seq329 Length=665889 Score = 127 bits (140), Expect = 3e-23 Identities = 145/193 (75%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 2035566 GACAAGCGCACCGACGACATTTCGCCGTGGGACAAGGCCTTTTGC--GAGGTCGACCAAC 2035623 || || ||||| ||||||||||| |||||| | | | ||| | |||| |||||| Sbjct 643425 GAAAAACGCACAGACGACATTTCCTCGTGGG--ATGCCGATTTCCTTAAGGTGGACCAAG 643368 Query 2035624 CCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATT 2035683 ||||| || || ||||| | |||||||| || || ||||||||| |||||||||| Sbjct 643367 GTACCCTATTCGAATTGATTTTAGCCGCCAATTATCTGGACATCAAGGGCCTCCTCGATG 643308 Query 2035684 TGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGA 2035743 | ||||| || || |||||| | ||||| ||||| | |||||||| || ||||||| Sbjct 643307 TCACATGCAAAACAGTAGCCAACATGATCAAAGGCAAAACACCCGAGGAGATACGCAAGA 643248 Query 2035744 CCTTTAACATCAA 2035756 | ||||| ||||| Sbjct 643247 CATTTAATATCAA 643235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7914965437536438