Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31]
12,042 sequences; 971,188,624 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq1094 98.7 6e-16
seq404 89.7 3e-13
>seq1094
Length=241507
Score = 98.7 bits (108), Expect = 6e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
|||||| |||||||| ||||| || | | |||| |||| |||| ||| || || || ||
Sbjct 166090 CTCCTTTTGAATGTTGTAGTCTGACAAGGTGCGACCATCCTCCAATTGTTTGCCAGCAAA 166149
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||||| ||||| || ||| | || | || || ||||| | ||||| |||||
Sbjct 166150 GATCAAACGTTGTTGATCTGGTGGGATACCTTCTTTGTCTTGGATTTTAGCCTTGACATT 166209
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| | || | || | ||| || || | ||| ||||| || || || |||||||| ||
Sbjct 166210 TTCAATAGTGTCGGAAGGCTCTACCTCCAAGGTAATGGTTTTACCGGTTAGGGTCTTGAC 166269
Query 34966 AAAGATCTGCAT 34977
||||||||||||
Sbjct 166270 AAAGATCTGCAT 166281
>seq404
Length=684826
Score = 89.7 bits (98), Expect = 3e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
|| ||||| ||||| ||||| || | |||| |||| |||| |||||| |||||||||
Sbjct 509200 TCTTTCTGGATGTTGTAGTCTGACAAAGTGCGACCATCTTCCAATTGCTTGCCGGCGAAG 509141
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|| | ||||| |||||| | || | || || || || | ||||| ||| || |
Sbjct 509140 ATTAAGCGTTGTTGGTCTGGGGGAATGCCTTCTTTATCTTGAATTTTAGCTTTCACATTT 509081
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
| || | || | ||||| || | || ||||| ||||| || |||||||| ||
Sbjct 509080 TCGATAGTATCGGATGGTTCGACTTCTAATGTGATGGTTTTTCCTGTCAGGGTCTTGACG 509021
Query 34967 AAGATCTGCATG 34978
||||| ||||||
Sbjct 509020 AAGATTTGCATG 509009
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325645000713998
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |