Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31]
12,042 sequences; 971,188,624 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq1431 86.0 5e-12
seq404 86.0 5e-12
>seq1431
Length=173026
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612
|| ||||| |||||||||||||||||||| ||||| |||||||| | ||| ||| |
Sbjct 151091 AAGATGCAGATTTTTGTCAAAACTTTAACGGGCAAGACCATTACGCTTGAAGTTGAGCCG 151150
Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672
||||| | | | ||||| |||||| || ||||| || | || |||
Sbjct 151151 TCTGATACAATAGAAAATGTAAAGGCCAAGATTCAGGACAAAGAGGGAATTCCACCTGAT 151210
Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732
|| || | | || | ||| || |||||||| || || | || | | ||||||
Sbjct 151211 CAACAACGTTTAATATTTGCCGGAAAACAGCTTGAAGATGGTCGTACGTTATCAGACTAC 151270
Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
||||| |||||||| || ||| | || | || ||| ||||||| || ||
Sbjct 151271 AACATACAAAAGGAATCAACGCTTCATTTAGTTTTGCGATTGCGTGGTGG 151320
>seq404
Length=684826
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
|||||||| || ||||| || || || ||||||||||| ||| ||||| ||| ||
Sbjct 506804 ATGCAAATCTTCGTCAAGACCTTGACTGGCAAAACCATCACCCTCGAAGTCGAGCCTTCG 506863
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| || ||| | || ||| |||||| || || |||||| | ||| || ||
Sbjct 506864 GACACCATCGAAAACGTGAAAGCCAAGATTCAAGACAAGGAAGGCATTCCCCCAGACCAA 506923
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||| | | |||| || || || ||| |||| || | ||| || | |||||||||
Sbjct 506924 CAGCGTTTGATTTTCGCCGGCAAGCAGTTGGAAGATGGTCGTACACTGTCCGACTACAAC 506983
Query 107736 ATTCAAAAGGAGTCTAC 107752
|| || |||||||||||
Sbjct 506984 ATCCAGAAGGAGTCTAC 507000
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398818260092938
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |