Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31]
12,042 sequences; 971,188,624 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq1090 156 4e-33
seq404 143 3e-29
seq1094 134 1e-26
seq1431 129 6e-25
>seq1090
Length=275775
Score = 156 bits (172), Expect = 4e-33
Identities = 887/1409 (63%), Gaps = 30/1409 (2%)
Strand=Plus/Plus
Query 7531 TTGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGTGGCGGTG 7590
|||||||| || || | || ||||| ||||| |||||| |||| ||||| ||
Sbjct 259793 TTGAAAATGAATGGTAAGATTGCCGAACGGCCGCAACATATGCTGATGCGTGTGGCCGTA 259852
Query 7591 GGCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCTTTGAAA 7650
|| ||||| || || ||||| || | ||| | ||||| || | | |||| |
Sbjct 259853 GGTATTCATGGAGAGGACATAGATTCGGCCATTGAAACTTATAACTGGTTGTCCGAGCGT 259912
Query 7651 CAGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCGCCTCAATTGTCC 7710
| ||||| || || |||||||| ||||||| || | |||||| || ||||||||
Sbjct 259913 TACTTTACCCATGCATCGCCCACATTGTTTGCTGCAGCCACAAATCGTCCACAATTGTCT 259972
Query 7711 TCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTGCGC 7770
|| ||||| | | |||||| | || || || ||||||| || | ||
Sbjct 259973 TCTTGTTTCCTCTTGACCATGGTTGCCGATTCTATTGAGGGCATTTTTAAGTCTGTGGAG 260032
Query 7771 GATTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACGACGTGCGC 7830
| || || | |||||||||| | || || || || | || || | | | |||
Sbjct 260033 CAGTGTGCTATGATTTCCAAATCAGCTGGAGGTATTGGAATCAATGTCCATTGCATTCGC 260092
Query 7831 GCCAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTTG 7890
|| || || | ||| | ||| || |||| ||| ||||| | |||||||||
Sbjct 260093 GCTAAGGGAACTTCCATAGCCGGCACTAATGGAACCTCCAATGGTTTGGTGCCCATGTTA 260152
Query 7891 CGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGGA---AAGCGCAAAGGCGCC 7947
| || |||||||| | | || | || || ||||| || || || || ||
Sbjct 260153 AGAGTATTCAATAATGTTGCACGCTACGTTGATCAGGGTGGTGGCAAACGTCCTGGTGCA 260212
Query 7948 GCTGCCATCTATTTGGAGCCGTGGCACGCGGACATTTACGCAGTGCTAAATCTGCGTCGC 8007
||||||||| ||||| || ||||| ||||||| | | ||| | || |
Sbjct 260213 TTTGCCATCTACTTGGAACCTTGGCATTCGGACATCTTTG-AGTTTT-----TGGATTTA 260266
Query 8008 AACATGGGTTGCG---AAGAC-AGCAAAGCGC--GCGATCTATTCTTCGGATTGTGGGTG 8061
|| | | | || |||| |||| | || | ||||| |||| | | ||| |
Sbjct 260267 AAAAAGAATACCGGCAAAGAAGAGCATCGTGCCAGAGATCTTTTCTATGCTCTTTGGATA 260326
Query 8062 CCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCACAATGGTCGCTCATGTGCCCCGAT 8121
|| ||| |||||||| | || || | ||| | ||||| || ||||| || |
Sbjct 260327 CCAGATTTGTTTATGCGACGTGTGGAAGAAAACGGCGATTGGTCCCTAATGTGTCCTCAC 260386
Query 8122 CGTTGCCCTTTATTAAAAAACGTTTACGGTTCAAAATTTGAACAATTGTACAAACAATAC 8181
|| || | | | | || | ||| | ||||||| | | ||| || |||||
Sbjct 260387 AAATGTCCAGGACTCCATGAGGTCTGGGGTGAAGAATTTGACAAGCTTTACGAAAAATAC 260446
Query 8182 GAACACGACGGC---GCGTACGTGCGGCAAGTGAAAGCGCGCGACCTGCACCGCGCCATT 8238
||| | | |||| || || | || | || |||| | || ||||||
Sbjct 260447 GAAAAGGCCGGCAAAGCTAACA-GAACCA--TTAAGGCGCAGGCGCTTTGGTTTGCCATT 260503
Query 8239 ATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGCAACGCC 8298
|| |||| ||| ||||| || | || |||||||| | || ||| |||| || |
Sbjct 260504 ATAGAATCCCAAGTAGAAACTGGAACTCCCTACATGCTATTTAAGGACTCTTGTAATCGC 260563
Query 8299 AAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAAATTGTA 8358
||||| |||||| || || ||||||||| ||||||||| ||||| | ||||| ||
Sbjct 260564 AAAAGTAATCAACAAAATGTTGGCACCATTAAATGCAGCAATTTGTGCACAGAAATCGTT 260623
Query 8359 CAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTCGGTGTGTTTAAACGCG 8418
| || || || || ||| | || || ||||| | || || | || | ||| |
Sbjct 260624 GAATATTCAGCACCGGATGAAATCGCTGTCTGCAACTTGGCCTCCATTTGCCTGAACATG 260683
Query 8419 TTCGTTGATCGACGCTC--AAACACTTACGACTTTGAACAATTGAAAAACGCCGTGCAAG 8476
|| || ||||| | ||| |||| |||||| | ||||||| | | |||
Sbjct 260684 TTTGT-----GACGCCCGAAAAAACTTTTGACTTTAAGAAATTGAAGACAGTATCTAAAG 260738
Query 8477 TGACGGTACGCAATTTAGATCGCATCATTGATGTCAATTTTTATCCCTTGGAAGAAGCGC 8536
| || |||||| | | ||||| |||||||| | ||||| || | || ||
Sbjct 260739 TCGTGGCGCGCAATCTCAACAAAATCATAGATGTCAACTACTATCCACTGCAGGAGGCCA 260798
Query 8537 GCGTATCGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCGACGCGT 8596
| ||| || | | || | ||| ||||| | || || || ||| | ||||| |
Sbjct 260799 GAAAATCTAATCTCAGACATCGTCCCATTGGCATTGGTGTCCAGGGTTTTGCCGATACTC 260858
Query 8597 TTGCCATGTTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCATGCTCAACATAAAAATAG 8656
| | |||| |||||||||||| | || || || | || | |||||
Sbjct 260859 TAATTCTCATGCGTTATCCCTACGAAAGCGAGGAGGCCTTCAAATTGAATCAACAAATAT 260918
Query 8657 CGGAAACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCCCGAGAATTGGGCA 8716
||||| | || || || || || ||||| || ||| || | || | || ||
Sbjct 260919 TTGAAACTATTTACTATGGTGCTTTGGAAGCAAGTTGTGAATTGGCTGAACAAGATGGTC 260978
Query 8717 CGTACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATACGACATGTGGA 8776
| || ||| |||| | || ||||| | ||| || ||| | ||||| ||||||||||
Sbjct 260979 CCTATGAAACGTATCCAGGAAGCCCAGTGAGCAAAGGTATACTTCAATATGACATGTGGA 261038
Query 8777 ATGTCACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAA-AATTGCTCAATTC 8835
| ||||||| | | ||| ||||| | | ||| | || |||||| ||
Sbjct 261039 ACAAGGTGCCCACCGATCTCTGGGATTGGGCTGCCCT-AAAGGAAAGAATTGCCAAACAT 261097
Query 8836 GGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCAAATAATG 8895
||| | |||||||||||| | |||| ||||||||| || ||||||| ||||| |||
Sbjct 261098 GGTGTACGCAATTCGCTGCTCCTGGCCCCCATGCCCACGGCTTCGACTGCCCAAATTATG 261157
Query 8896 GGAAACAACGAATCCTTTGAGCCGTTCAC 8924
|| ||||| ||| | || || |||| |||
Sbjct 261158 GGCAACAATGAAGCTTTCGAACCGTACAC 261186
>seq404
Length=684826
Score = 143 bits (158), Expect = 3e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
||||| | || || | ||| | || || || |||||||| || ||||||||||| | |
Sbjct 509464 CCTCCGCGAAGACGAAGCACCAAATGGAGTGTTGATTCCTTCTGGATGTTGTAGTCCGAC 509405
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | || || || || | ||||||||| ||||| |||||||| |||||||| || ||
Sbjct 509404 AATG-TGCGACCATCTTCCAACTGTTTGCCGGCAAAGATCAAACGTTGCTGATCTGGGGG 509346
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
||||||||||| ||||||||||| ||||| || | || || || | ||||||
Sbjct 509345 AATGCCTTCTTTATCTTGAATTTTGGCCTTGACATTTTCTATGGTATCAGAGGGTTCCAC 509286
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | ||||| || || || || ||||| || ||||||||||||||
Sbjct 509285 TTCCAACGTAATTGTCTTTCCAGTCAAAGTCTTGACGAAAATTTGCAT 509238
Score = 123 bits (136), Expect = 3e-23
Identities = 149/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570
||||| || ||||| ||||||||||| |||||| | || | ||| || | ||
Sbjct 506778 TGTAGTGTAGATTCTTTTTGAATGTTATAGTCGGACAATGTACGTCCGTCTTCCAATTGC 506719
Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630
||||| || |||||||||||||| ||||| || || || |||||||| |||||||||||
Sbjct 506718 TTGCCAGCGAAAATCAAACGCTGTTGATCTGGGGGAATACCTTCTTTGTCTTGAATTTTG 506659
Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690
|| || || | || || || | ||| || || || || || ||||| || |||
Sbjct 506658 GCCTTAACATTTTCTATAGTATCAGAAGGTTCAACTTCCAGTGTGATAGTTTTTCCCGTT 506599
Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713
|| || |||||||| ||||||||
Sbjct 506598 AATGTCTTAACGAATATTTGCAT 506576
Score = 123 bits (136), Expect = 3e-23
Identities = 166/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| ||||| || | || || || || ||||| || ||||||||||||
Sbjct 507030 CCACCACGGAGACGCAAAACTAAATGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGG-- 506973
Query 134547 ACGGTGTGAGAG--TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604
|| |||| || || || | ||| ||||| || |||||||||||||| || || || |
Sbjct 506972 ACAGTGTACGACCATCTTCCAACTGCTTGCCGGCGAAAATCAAACGCTGTTGGTCTGGGG 506913
Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664
| |||||||| || |||||||| || ||| || || | ||||| || | || |
Sbjct 506912 GAATGCCTTCCTTGTCTTGAATCTTGGCTTTCACGTTTTCGATGGTGTCCGAAGGCTCGA 506853
Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
| ||||| || |||||||| || || || || || ||||| ||||||||
Sbjct 506852 CTTCGAGGGTGATGGTTTTGCCAGTCAAGGTCTTGACGAAGATTTGCAT 506804
Score = 109 bits (120), Expect = 6e-19
Identities = 157/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554
|| ||||| || | || | || ||||| |||||||| ||||| || | ||| | | |
Sbjct 506565 AGGCGCAATACCAAATGCAATGTAGATTCTTTTTGAATATTGTAATCAGACAATGTTC-G 506507
Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614
||| || ||||| ||||| || |||||||| ||||| || || || || || |||||
Sbjct 506506 CCCGTCTTCAAGCTGCTTGCCAGCGAAAATCAATCGCTGTTGGTCTGGTGGGATTCCTTC 506447
Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674
||| ||||||||||| ||| || || | || || || | || || || | ||
Sbjct 506446 TTTGTCTTGAATTTTGGCTTTAACATTTTCAATGGTATCAGAAGGCTCAACCTCCAAGGT 506387
Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||||||||| || || ||||| || || ||||||||
Sbjct 506386 GATGGTTTTACCAGTCAATGTTTTTACAAAGATTTGCAT 506348
Score = 107 bits (118), Expect = 2e-18
Identities = 148/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570
|| || || ||||||||||| || || || ||| | ||| | || || ||||||
Sbjct 506322 TGAAGTGTAGATTCCTTTTGGATATTATAATCGGACAAGGTACGTCCATCTTCCAGCTGT 506263
Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630
|| || ||||| |||||||| || ||||| || || ||||||||||| |||||||| ||
Sbjct 506262 TTACCGGCAAAGATCAAACGTTGTTGATCTGGAGGAATGCCTTCTTTATCTTGAATCTTG 506203
Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690
||| || || | || || || | ||| || || | || ||||| || || |||
Sbjct 506202 GCTTTAACATTTTCAATGGTATCAGAGGGTTCAACCTCCAATGTGATGGTCTTGCCAGTT 506143
Query 134691 AAAGTTTTAACGAAAATTTGCATTTTG 134717
|| || || ||||| || ||||| |||
Sbjct 506142 AATGTCTTCACGAAGATCTGCATATTG 506116
Score = 95.1 bits (104), Expect = 1e-14
Identities = 145/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTG 134569
|| || || ||||| || || ||||||||||| | ||| | || || || || | ||
Sbjct 509212 TGGAGGGTAGATTCTTTCTGGATGTTGTAGTCTGACAAAG-TGCGACCATCTTCCAATTG 509154
Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629
||||| || || || || || || || || || || ||||||||||| |||||||||||
Sbjct 509153 CTTGCCGGCGAAGATTAAGCGTTGTTGGTCTGGGGGAATGCCTTCTTTATCTTGAATTTT 509094
Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689
||| || || | || ||||| | ||| || || | || |||||||| || ||
Sbjct 509093 AGCTTTCACATTTTCGATAGTATCGGATGGTTCGACTTCTAATGTGATGGTTTTTCCTGT 509034
Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713
| || || ||||| ||||||||
Sbjct 509033 CAGGGTCTTGACGAAGATTTGCAT 509010
>seq1094
Length=241507
Score = 134 bits (148), Expect = 1e-26
Identities = 152/201 (76%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 134517 GTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCC 134575
|| || |||||||||||||||||||| | ||| |||| || || || | ||||||||
Sbjct 166085 GTCGACTCCTTTTGAATGTTGTAGTCTGACAA-GGTGCGACCATCCTCCAATTGTTTGCC 166143
Query 134576 TGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTT 134635
||||| |||||||| || ||||| || || || |||||||| ||||| ||||| ||
Sbjct 166144 AGCAAAGATCAAACGTTGTTGATCTGGTGGGATACCTTCTTTGTCTTGGATTTTAGCCTT 166203
Query 134636 GACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGT 134695
||| || | |||||||| | || || || | ||||||||||||||||||| ||
Sbjct 166204 GACATTTTCAATAGTGTCGGAAGGCTCTACCTCCAAGGTAATGGTTTTACCGGTTAGGGT 166263
Query 134696 TTTAACGAAAATTTGCATTTT 134716
|| || || || ||||||||
Sbjct 166264 CTTGACAAAGATCTGCATTTT 166284
>seq1431
Length=173026
Score = 129 bits (142), Expect = 6e-25
Identities = 162/220 (74%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 134498 TCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAG 134556
|||||| || | || ||||| ||||||||||| ||||||||||| | |||| | ||
Sbjct 151309 TCGCAAAACTAAATGAAGCGTTGATTCCTTTTGTATGTTGTAGTCTGATAACG-TACGAC 151251
Query 134557 AGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTT 134616
|| || |||||||| || ||||| || ||||| || ||||| || || || || ||||
Sbjct 151250 CATCTTCAAGCTGTTTTCCGGCAAATATTAAACGTTGTTGATCAGGTGGAATTCCCTCTT 151191
Query 134617 TTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAA 134676
| || ||||| || || || || | ||| || |||| || || || || ||||
Sbjct 151190 TGTCCTGAATCTTGGCCTTTACATTTTCTATTGTATCAGACGGCTCAACTTCAAGCGTAA 151131
Query 134677 TGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716
|||| || || ||||||||||| || ||||| ||||| ||
Sbjct 151130 TGGTCTTGCCCGTTAAAGTTTTGACAAAAATCTGCATCTT 151091
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505322324905840
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