Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31] 12,042 sequences; 971,188,624 total letters Query= NC_027916.2 Length=160358 Score E Sequences producing significant alignments: (Bits) Value seq326 89.7 5e-13 >seq326 Length=702362 Score = 89.7 bits (98), Expect = 5e-13 Identities = 181/269 (67%), Gaps = 0/269 (0%) Strand=Plus/Minus Query 31136 TTAATTGCTCTCGGAGACCTTCGATGTGATTGACATAAATATGCGCATCGCCAATAGAGT 31195 |||||||||| | | ||| | ||| || ||| | ||| |||||||| | | || Sbjct 510190 TTAATTGCTCCCTCAATGGTTCAACGTGGTTCTTATATACATGGGCATCGCCCAATGTGT 510131 Query 31196 GTACCAATTCCCCTGGTCTTAGATGGGTCAATTTGGCAATCACATGAACCAAAAGCGCAT 31255 |||| || || || || |||| || | | |||||||| || ||| | |||| Sbjct 510130 GTACAAAATCACCAGGCTTTAGGCCAGTTATGTGGGCAATCATATAGGTCAACAAGGCAT 510071 Query 31256 AACTCGCTATGTTGAATGGTACACCCAATCCCAAATCGGCAGATCGTTGATATAACAAAC 31315 | || |||||||||||||| || || |||| |||||| ||||||||||| || Sbjct 510070 ATGAGGCAATGTTGAATGGTACTCCTAAGCCCATGTCGGCACTGCGTTGATATAATTGAC 510011 Query 31316 AGGAAAGTTCATCTCCGGTCACGTAAAATTGAAATAACACATGACAAGGCGGCAAAGCCA 31375 | || || ||| | || || ||||| || || |||||| || |||||||||| Sbjct 510010 AAGATAGCTCACCATTGGCAACATAAAACTGGGCCAAGCAATGACAGGGAGGCAAAGCCA 509951 Query 31376 TTTCACAGGTATCGACGGGATTCCAAGCG 31404 | | | || | ||||||||||||| Sbjct 509950 TCTGCGGCATGTCCATGGGATTCCAAGCG 509922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512940378025760