Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31]
12,042 sequences; 971,188,624 total letters
Query= NC_027916.2
Length=160358
Score E
Sequences producing significant alignments: (Bits) Value
seq326 89.7 5e-13
>seq326
Length=702362
Score = 89.7 bits (98), Expect = 5e-13
Identities = 181/269 (67%), Gaps = 0/269 (0%)
Strand=Plus/Minus
Query 31136 TTAATTGCTCTCGGAGACCTTCGATGTGATTGACATAAATATGCGCATCGCCAATAGAGT 31195
|||||||||| | | ||| | ||| || ||| | ||| |||||||| | | ||
Sbjct 510190 TTAATTGCTCCCTCAATGGTTCAACGTGGTTCTTATATACATGGGCATCGCCCAATGTGT 510131
Query 31196 GTACCAATTCCCCTGGTCTTAGATGGGTCAATTTGGCAATCACATGAACCAAAAGCGCAT 31255
|||| || || || || |||| || | | |||||||| || ||| | ||||
Sbjct 510130 GTACAAAATCACCAGGCTTTAGGCCAGTTATGTGGGCAATCATATAGGTCAACAAGGCAT 510071
Query 31256 AACTCGCTATGTTGAATGGTACACCCAATCCCAAATCGGCAGATCGTTGATATAACAAAC 31315
| || |||||||||||||| || || |||| |||||| ||||||||||| ||
Sbjct 510070 ATGAGGCAATGTTGAATGGTACTCCTAAGCCCATGTCGGCACTGCGTTGATATAATTGAC 510011
Query 31316 AGGAAAGTTCATCTCCGGTCACGTAAAATTGAAATAACACATGACAAGGCGGCAAAGCCA 31375
| || || ||| | || || ||||| || || |||||| || ||||||||||
Sbjct 510010 AAGATAGCTCACCATTGGCAACATAAAACTGGGCCAAGCAATGACAGGGAGGCAAAGCCA 509951
Query 31376 TTTCACAGGTATCGACGGGATTCCAAGCG 31404
| | | || | |||||||||||||
Sbjct 509950 TCTGCGGCATGTCCATGGGATTCCAAGCG 509922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 512940378025760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |