Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31] 12,042 sequences; 971,188,624 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq305 98.7 3e-15 >seq305 Length=710094 Score = 98.7 bits (108), Expect = 3e-15 Identities = 107/141 (76%), Gaps = 1/141 (1%) Strand=Plus/Minus Query 443718 GCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTT 443777 |||||||||| || ||||| | || || |||||||| ||| |||||||| |||||||| Sbjct 408690 GCTTTTGCTGCTGTTGAAGGCATATTCTTCAGCGGCAGTTTT-GCCTCCATTTTCTGGTT 408632 Query 443778 GAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGACGA 443837 ||| || ||||| || |||| ||| | || || ||||| ||||| || ||||| Sbjct 408631 GAAGAAACGTGGCCTAATGCCCGGCTTAACATTCTCCAACGAGCTGATATCGCGTGACGA 408572 Query 443838 GGGTTTGCATTGCGACTTCGC 443858 ||||||||||| || || || Sbjct 408571 AGGTTTGCATTGTGATTTTGC 408551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588090938616690