Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31] 12,042 sequences; 971,188,624 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2111 82.4 1e-10 >seq2111 Length=88771 Score = 82.4 bits (90), Expect = 1e-10 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 11624 CCCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCA 11683 ||||| ||||| || ||||| || || | ||| || || ||||| ||| || || || Sbjct 7257 CCCACAGCATCGATTTCATCGATAAACAGAATGCAAGGAGCATTTTTGCGTGCCATGGCA 7316 Query 11684 AAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCA 11743 || | || || || | || ||| |||||||||||||| |||| ||| | || | || Sbjct 7317 AACATGTCACGTACACGAGAGGGACCAACACCAACAAACATTTCCAAAAACTCTGAGCCA 7376 Query 11744 GAGCACTG-GATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTT 11802 ||| |||| ||||| || ||||| | ||| || || ||||| || | | ||||| Sbjct 7377 GAG-ACTGTAATGAAAGGCACATTGGCTTCTCCGGCAGTGGCTTTAGCCAACATAGTCTT 7435 Query 11803 TCCCGTACCTGG 11814 ||| || || || Sbjct 7436 TCCTGTGCCAGG 7447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627937465483200