Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31]
12,042 sequences; 971,188,624 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq2111 82.4 1e-10
>seq2111
Length=88771
Score = 82.4 bits (90), Expect = 1e-10
Identities = 135/192 (70%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 11624 CCCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCA 11683
||||| ||||| || ||||| || || | ||| || || ||||| ||| || || ||
Sbjct 7257 CCCACAGCATCGATTTCATCGATAAACAGAATGCAAGGAGCATTTTTGCGTGCCATGGCA 7316
Query 11684 AAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCA 11743
|| | || || || | || ||| |||||||||||||| |||| ||| | || | ||
Sbjct 7317 AACATGTCACGTACACGAGAGGGACCAACACCAACAAACATTTCCAAAAACTCTGAGCCA 7376
Query 11744 GAGCACTG-GATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTT 11802
||| |||| ||||| || ||||| | ||| || || ||||| || | | |||||
Sbjct 7377 GAG-ACTGTAATGAAAGGCACATTGGCTTCTCCGGCAGTGGCTTTAGCCAACATAGTCTT 7435
Query 11803 TCCCGTACCTGG 11814
||| || || ||
Sbjct 7436 TCCTGTGCCAGG 7447
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627937465483200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |