Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31]
12,042 sequences; 971,188,624 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq305 91.5 2e-13
>seq305
Length=710094
Score = 91.5 bits (100), Expect = 2e-13
Identities = 117/156 (75%), Gaps = 4/156 (3%)
Strand=Plus/Minus
Query 59980 AACGTCTCATAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTG-C 60037
||||| | ||||||||||| ||| || ||||| || |||||| ||| ||| || |
Sbjct 408701 AACGTGTAATAGCTTTTGC-TGCTGTTGAAGGCATATTCTTCAGCGGCA-GTTTTGCCTC 408644
Query 60038 TATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGAT 60097
||||||||| | || || |||||||| ||||| ||| | | |||||||||||||||||
Sbjct 408643 CATTTTCTGGTTGAAGAAACGTGGCCTAATGCCCGGCTTAACATTCTCCAACGAGCTGAT 408584
Query 60098 TTCCCGGGACGAGGGCCTCCATCAGGAGTTTGCAGT 60133
|| || ||||| || | ||| || ||||| ||
Sbjct 408583 ATCGCGTGACGAAGGTTTGCATTGTGATTTTGCTGT 408548
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548442233304480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |