Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31] 12,042 sequences; 971,188,624 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq305 91.5 2e-13 >seq305 Length=710094 Score = 91.5 bits (100), Expect = 2e-13 Identities = 117/156 (75%), Gaps = 4/156 (3%) Strand=Plus/Minus Query 59980 AACGTCTCATAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTG-C 60037 ||||| | ||||||||||| ||| || ||||| || |||||| ||| ||| || | Sbjct 408701 AACGTGTAATAGCTTTTGC-TGCTGTTGAAGGCATATTCTTCAGCGGCA-GTTTTGCCTC 408644 Query 60038 TATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGAT 60097 ||||||||| | || || |||||||| ||||| ||| | | ||||||||||||||||| Sbjct 408643 CATTTTCTGGTTGAAGAAACGTGGCCTAATGCCCGGCTTAACATTCTCCAACGAGCTGAT 408584 Query 60098 TTCCCGGGACGAGGGCCTCCATCAGGAGTTTGCAGT 60133 || || ||||| || | ||| || ||||| || Sbjct 408583 ATCGCGTGACGAAGGTTTGCATTGTGATTTTGCTGT 408548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548442233304480