Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31] 12,042 sequences; 971,188,624 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq326 120 3e-22 >seq326 Length=702362 Score = 120 bits (132), Expect = 3e-22 Identities = 221/323 (68%), Gaps = 6/323 (2%) Strand=Plus/Minus Query 118375 AAATCTTCAAACTTAAAGTCTTCTATATTTTTGA---TATCCTTGTTTATGGATAGTGTG 118431 ||||||||||| |||||||| || |||| || | || ||| |||| || || Sbjct 510269 AAATCTTCAAATTTAAAGTCCTCAATATCTTCTACTTTACGTTTGATTATCAATT---TG 510213 Query 118432 GGAAACGGGAGAGGCTCCCTTGTGAGTTGGAGTTTCAGTGGCTCAATGTGATTCATATAG 118491 ||||| || || | | | | | ||| ||| ||| |||| ||| ||| |||| Sbjct 510212 GGAAAAGGTCTGGGTTTGCGTTTTAATTGCTCCCTCAATGGTTCAACGTGGTTCTTATAT 510153 Query 118492 ACATGAGCATCCCCAATTGTATGTATGAATTCACCAGGTGTAAGCCCTGTCAGGTGAGCA 118551 ||||| ||||| || | ||| |||| || |||||||| | || || || | ||| ||| Sbjct 510152 ACATGGGCATCGCCCAATGTGTGTACAAAATCACCAGGCTTTAGGCCAGTTATGTGGGCA 510093 Query 118552 ATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCCATGTCT 118611 ||||| || |||||||| || ||| | || || || || || | |||||||| Sbjct 510092 ATCATATAGGTCAACAAGGCATATGAGGCAATGTTGAATGGTACTCCTAAGCCCATGTCG 510033 Query 118612 GCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACTGACTTATG 118671 || | || || ||||| ||||| ||||| || || |||||||||||||| | | Sbjct 510032 GCACTGCGTTGATATAATTGACAAGATAGCTCACCATTGGCAACATAAAACTGGGCCAAG 509973 Query 118672 ATGTGACATGGAGGCAGAACCAT 118694 ||||| ||||||| | |||| Sbjct 509972 CAATGACAGGGAGGCAAAGCCAT 509950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414415970607688