Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31]
12,042 sequences; 971,188,624 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq305 259 4e-64
>seq305
Length=710094
Score = 259 bits (286), Expect = 4e-64
Identities = 497/719 (69%), Gaps = 18/719 (3%)
Strand=Plus/Plus
Query 4371 ACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCA 4430
|| |||| || || ||||||||||| ||||||| | ||| | || || || || |||
Sbjct 408371 ACTAGCAGACGATCTGCTACAAATTCAATATACTCGGACATTAAATCACAATTCATACCA 408430
Query 4431 ATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTG 4490
|| || | || | || | ||| | || || ||||| || | || |||||| |
Sbjct 408431 ATCAAATTGCATGGCAATGCTTCTGTAAGGAATTCCTGTTCGATTTTAACCGCTTCTCTT 408490
Query 4491 ATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAA-ACA 4549
||||| || | || ||| | || || | || | || ||||| || |||
Sbjct 408491 ATTATCTCAATGATACGTTCTCTGCTGGGCTTCTGCACCAGATACTTAAACATCAATACA 408550
Query 4550 CGCAAAATCACAATGCAAACCTTCGTCTCTGCTA-ATCAGTTCGTTAGAAAACGTTAATC 4608
|||||||||||||||||||||||||| | || | ||||| ||||| || || ||||| |
Sbjct 408551 -GCAAAATCACAATGCAAACCTTCGTCAC-GCGATATCAGCTCGTTGGAGAATGTTAAGC 408608
Query 4609 CGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAA--TGACCCAGAAAAGAA 4666
||||||||| || | || || | ||| || || | |||||| || | | ||| |||
Sbjct 408609 CGGGCATTAGGCCACGTTTCTTCAACCAGAAAATGGAGGCAAAACTGCCGCTGAA--GAA 408666
Query 4667 TATGCCTTCTACGGCGGCAAACGCTACTAATCGGG-ACCCGAACGAGCTGGCTTTGTCTT 4725
||||||||| || || ||||| |||| || || ||| || ||| | | |
Sbjct 408667 TATGCCTTCAACAGCAGCAAAAGCTATTACACGTTCACCAAAATTAGCAGAATCCGATGA 408726
Query 4726 TAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGT 4785
|| ||||| || ||||| | ||||||| | ||||| || || || | || || |
Sbjct 408727 TA-TCCATGACAAAGCCCAATCAGCTTTTCTTTTAACAGCTGGCATAGTTTCAATGGCAT 408785
Query 4786 TAAATAA---TTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTAT 4842
| ||||| || || || ||| | |||| |||||| ||||| || || | ||| |
Sbjct 408786 TGAATAAATATTCACGTTGGTCAC---GATCTTTAATATAGGTGTCAATAAGAATGCTGT 408842
Query 4843 ACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTG 4902
||||||| || || | ||| || ||||||||||| || || || ||||| | ||||| |
Sbjct 408843 ACATTTCCGAGTGAACATTCTCCATAGCAATCTGGAAGCCATAGAAGCAGCGGGCTTCAG 408902
Query 4903 TTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGG 4962
||||||| || || | | ||||||| || || | || || || ||||| || || ||
Sbjct 408903 TTACTTGCACCTCTTGAGAAAATCTCTCGACAAGATTCTCATTAACTATGCCATCGGAGG 408962
Query 4963 CTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCT-TAAGTTTTTTC 5021
| ||||| || ||||| ||||| || || || || ||| | | || | ||||| | |
Sbjct 408963 CAGCAAAGAAAGCCAACACATGGGAAATGAAATATCTTTCAT-TGTCTGTGAGTTTCTCC 409021
Query 5022 CAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGC 5080
|||| | || |||||||| | ||| ||||| |||||||||||||| || || || ||
Sbjct 409022 CAGTCAGACATATCTTTAGACAGATCCACTTCCTCAACAGTCCAAAATGATGCCTCAGC 409080
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 426986925399986
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |