Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31]
12,042 sequences; 971,188,624 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq1090 515 6e-141
seq305 279 7e-70
>seq1090
Length=275775
Score = 515 bits (570), Expect = 6e-141
Identities = 1489/2262 (66%), Gaps = 41/2262 (2%)
Strand=Plus/Minus
Query 75373 CAAC-GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTT 75431
|||| ||||| || || | | || |||||||| || | | ||| ||||| || || |
Sbjct 261581 CAACAGTGAATTGTATAGCATTGGCAGCTGGTTTAGTTCTCAAATAATACATGCCCGTCT 261522
Query 75432 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGG 75491
| || || |||| |||||||| || || | |||| || | || ||||
Sbjct 261521 TAAGGCCAGCTTTCCAGGAATAGAAATGTATTGAAGTCAATTTGCCGTAGTTGGGCTCGG 261462
Query 75492 CTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 75551
| | ||| ||||| | || |||||||| || ||||||||||| | |||||| |||||||
Sbjct 261461 CCACATGTATATTGAAGGATTGACTTTGGTCAATGAAAGCTCCACGATCAGCAGCCATTT 261402
Query 75552 TTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTG 75611
| || ||||||| || ||||||||| | |||||| | | | | || || | |
Sbjct 261401 TAATGGTGGTCTTGACAGAAATTTCCCATACCGTTTTGTAGAGCTCTCGTATTTCTTTGG 261342
Query 75612 GAAGAT--TTG-TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCAT 75668
||| | | | | ||||| ||||| || | ||| |||||| |||| || || || |
Sbjct 261341 GAATTTCCTCGATGTTTTGTATGGAGCCACGGCTAGAAATAATTTTATTTTTCATTTCCT 261282
Query 75669 CATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATT 75728
||| ||| | | ||||| ||| || |||| | |||| |||| ||||| | ||||
Sbjct 261281 CATCCCATAGGTCGAGTTCGGTCAAATCTTTAAGCAAATGATGATTGACAATGTTGAATT 261222
Query 75729 CTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGT 75788
| || || | ||| | || || ||||| || || || ||||| | || ||||||||
Sbjct 261221 CACCCGATAGTACACGGCGTGTATAAATGTTTGAAGTGTACGGTTCGAAAGCTTCATTGT 261162
Query 75789 TTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGA 75848
| |||| |||||| ||||| ||||| || ||||| || |||| | | ||| | |
Sbjct 261161 TGCCCATAATTTGGGCAGTCGAAGCCGTGGGCATGGGGGCCAGGAGCAGCGAATTGCGTA 261102
Query 75849 GACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAA 75908
||||||| | ||| | || ||||| ||||||||| ||||| | || ||
Sbjct 261101 CACCATGTTTGGCAATTCTTTCCTTTAGGGCAGCCCAATCCCAGAGATCGGTGGGCACCT 261042
Query 75909 CATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTCGT 75968
| ||| | || ||||| || || || ||||| | ||| ||| ||||| |
Sbjct 261041 TGTTCCACATGTCATATTGAAGTATACCTTTGCTCACTGGGCTTCCTGGATACGTTTCAT 260982
Query 75969 AAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTT 76028
| | || || | |||||| | ||| ||||| || || || ||||| || ||||| ||||
Sbjct 260981 AGGGACCATCTTGTTCAGCCAATTCACAACTTGCTTCCAAAGCACCATAGTAAATAGTTT 260922
Query 76029 CGAAAATCTTCTTATTAAGATCTTG--CGCTTCAAGACTATCAAAAGGATAATGTAAAAG 76086
| || || | | ||| | || ||| || || || || | |||||| | | ||
Sbjct 260921 CAAATATTTGTTGATTCA-AT-TTGAAGGCCTCCTCGCTTTCGTAGGGATAACGCATGAG 260864
Query 76087 AATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGA 76146
||| | | ||| || | ||||| || ||||| ||||| || | |||||| ||| |
Sbjct 260863 AATTAGAGTATCGGCAAAACCCTGGACACCAATGCCAATGGGACGATGTCTGAGATTAG- 260805
Query 76147 AATTTCAG--CTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTG 76204
| |||| | || ||| | | || || || || | |||||| ||||| |||||||| |
Sbjct 260804 ATTTTCTGGCCTCCTGCAGT-GGATAGTAGTTGACATCTATGATTTTGTTGAGATTGCGC 260746
Query 76205 ACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAA---TTTTCCATCTATCACA 76261
| || |||||| || ||| | ||| ||| ||||| |||| | |||||
Sbjct 260745 GCCACGACTTTAGATACTGTCTTCAATTTCTTAAAGTCAAAAGTTTTTTCGGGCGTCACA 260686
Query 76262 AACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATAT 76321
||||| || || || || || | || || || || | |||| | | ||||
Sbjct 260685 AACATGTTCAGGCAAATGGAGGCCAAGTTGCAGACAGCGATTTCATCCGGTGCTGAATAT 260626
Query 76322 TGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTC 76381
| | || || ||||| | ||| || || || || || |||| ||||||||| || ||
Sbjct 260625 TCAACGATTTCTGTGCACAAATTGCTGCATTTAATGGTGCCAACATTTTGTTGATTACTT 260566
Query 76382 TTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCG 76441
|| ||||| ||||||||| | || | | |||||||||||||| | || |||||
Sbjct 260565 TTGCGATTACAAGAGTCCTTAAATAGCATGTAGGGAGTTCCAGTTTCTACTTGGGATTCT 260506
Query 76442 ATAATAGATTTCCAGA-CGACTCTAGCTTTTATTATAGATTTGTATCGCTT----CTCTC 76496
||||| | ||| | || || || | || | | ||| | |||| |
Sbjct 260505 ATAATGGCAAACCAAAGCGCCTGCGCCT----TAATGGTTCTGT-TAGCTTTGCCGGCCT 260451
Query 76497 TTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGAC 76556
|||| |||| | || | | |||||||| || ||||| || |||| | || ||||
Sbjct 260450 TTTCGTATTTTTCGTAAAGCTTGTCAAATTCTTCACCCCAGACCTCATGGAGTCCTGGAC 260391
Query 76557 ATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGAT 76616
||| | |||||||| | ||||| || || | ||| | || ||| |||||| | ||
Sbjct 260390 ATTTGTGAGGACACATTAGGGACCAATCGCCGTTTTCTTCCACACGTCGCATAAACAAAT 260331
Query 76617 CAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCT 76676
| |||||||| |||||| || ||||||| || | | | ||||| || || |||||||
Sbjct 260330 CTGGTATCCAAAGAGCATAGAAAAGATCTCTGGCACGATGCTCTTCTTTGCCGGTATTCT 260271
Query 76677 TTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAA 76736
|||| | ||| | ||||| | || || |||||||| ||||| | || || || |
Sbjct 260270 TTTTTAAATCCAAAAACTCAAAGATGTCCGAATGCCAAGGTTCCAAGTAGATGGCAAATG 260211
Query 76737 CACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCA 76796
|||| || ||||| ||| |||||||| | || | ||| ||||| | ||||| |
Sbjct 260210 CACCAGGACGTTTGCCACCACCCTGATCAACGTAGCGTGCAACATTATTGAATACTCTTA 260151
Query 76797 ACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCAC 76856
|||| || | | || || || || ||||| || || | || || |||| || |
Sbjct 260150 ACATGGGCACCAAACCATTGGAGGTTCCATTAGTGCCGGCTATGGAAGTTCCCTTAGCGC 260091
Query 76857 GAAT--ATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCG 76914
|||| | | || ||| || || ||||| || ||| || || | |||||| |
Sbjct 260090 GAATGCAATGGACATTGAT--TCCAATACCTCCAGCTGATTTGGAAATCATAGCACACTG 260033
Query 76915 TTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCT 76974
| || | | | | |||||||| ||| ||| | | |||| | | || |||||
Sbjct 260032 CTCCACAGACTTAAAAATGCCCTCAATAGAATCGGCAACCATGGTCAAGAGGAAACAAGA 259973
Query 76975 AGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCA 77034
||||| ||| || || || ||||| ||||||||| || |||||||| || || |
Sbjct 259972 AGACAATTGTGGACGATTTGTGGCTGCAGCAAACAATGTGGGCGATGCATGGGTAAAGTA 259913
Query 77035 TTTTTCAGA-AAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTC 77093
|| || || || || || |||||||| | | ||||| ||| | |||||| |
Sbjct 259912 ACGCTCGGACAACCAG-TTATAAGTTTCAATGGCCGAATCTATGTCCTCTCCATGAATAC 259854
Query 77094 CTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCA 77153
|||| || |||||||||| |||||| || || ||||| || ||||| ||| |||||||
Sbjct 259853 CTACGGCCACACGCATCAGCATATGTTGCGGCCGTTCGGCAATCTTACCATTCATTTTCA 259794
Query 77154 ACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGT 77213
| | ||||| ||| | ||| ||||| ||||| |||||||| ||| || | ||||
Sbjct 259793 ATAGATATGAGCGTTCTAGAGTCTTAAATCCAAAGTAGTTGTAGCCAAAATCACGGTCGT 259734
Query 77214 AAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACAATAT--CCATGACAGTGGT 77271
| | ||| |||| || || ||| || ||| | || | || |||| | | |
Sbjct 259733 ATACAATGGCCGAGTTGAGGCGCTCCGAATTTTTCATGACCACATTATAATGAAAATCG- 259675
Query 77272 AGAAATAATTGGAGATCGTATTCCATTTTTAGGATTAACATAGTTAAATAAGTCTTCCAT 77331
||||| |||| | | | |||| | | | | || | | | | ||| ||
Sbjct 259674 -GAAATCATTGATGCCCTTTGTCCAGTCTCGTCACTGACGAAATGATGCAGGTCACTGAT 259616
Query 77332 TACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGC 77391
|| || || | ||||| ||||| ||||| | || || || || || | ||| ||
Sbjct 259615 GACTTCCGAGAAAACCTTTTTAGTTTCTTTGTGCAAGTTGGACACAGCAATGCGAGCCGC 259556
Query 77392 TAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGT 77451
| | ||||| || | ||| | ||| ||| ||||| ||| ||||||| || ||| |
Sbjct 259555 CAACAAAGCATAATCGGCATGATTTGTTGTGAGTGTGGCAGCTGTTTCTGCGGCCAAATT 259496
Query 77452 ATCTAATTCTATAGTAGTAACTCCGTTATA-TAGCCCTTGAATAACTTTCATGGCTATTT 77510
|| |||| | ||| || || ||| ||| | || |||| || | || | || |||
Sbjct 259495 GTCCAATTGTTGAGTTGTGACGCCGCAATACAAACCATTGATTACCCTT-AAGGTTATGG 259437
Query 77511 TGATAGGATCTACAAACTCGGTGTTCAAACCATAACATAATTTTCT-AATACGAGATGTG 77569
| ||||| || || || |||| | ||||| || || ||||| || || || ||
Sbjct 259436 CCACTGGATCGACGAAGTCCATGTTGAGGCCATAGCA-AAGTTTCTGGATGCGTGAAGTA 259378
Query 77570 ATTTTATCAAACATG-ACATTCTCCTTACATCCATTTCGTTT 77610
|| ||||| || ||| || | ||| || | |||| |||||
Sbjct 259377 ATCTTATCGAA-ATGTACTTCCTCTTTGCGGCCATCACGTTT 259337
>seq305
Length=710094
Score = 279 bits (308), Expect = 7e-70
Identities = 494/709 (70%), Gaps = 11/709 (2%)
Strand=Plus/Plus
Query 46458 CAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAG 46517
||| | |||||| || ||||| |||||| ||| | ||||||||||| || || |
Sbjct 408376 CAGACGATCTGCTACAAATTCAATATACTCGGACATTAAATCACAATTCATACCAATCAA 408435
Query 46518 TTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTAT 46577
||| || | || || ||||| || || ||||| || | || || || ||||||
Sbjct 408436 ATTGCATGGCAATGCTTCTGTAAGGAATTCCTGTTCGATTTTAACCGCTTCTCTTATTAT 408495
Query 46578 CG--ATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAA-ACATGC 46634
| ||| ||| ||| || || || |||| || || |||||||| || ||| ||
Sbjct 408496 CTCAATGATAC-GTTCTCTG-CTGGGCTTCTGCACCAGATACTTAAACATCAATACA-GC 408552
Query 46635 AAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGG 46694
|||||||||||| | ||||| || | || | ||||| || ||||| | || ||
Sbjct 408553 AAAATCACAATGCAAACCTTCGTCACGCGATATCAGCTCGTTGGAGAATGTTAAGCCGGG 408612
Query 46695 CATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCC 46754
|||||| ||||| || || | ||| || || | || ||| || |||||||||||
Sbjct 408613 CATTAGGCCACGTTTCTTCAACCAGAAAATGGAGGCAAAACTGCCGCTGAAGAATATGCC 408672
Query 46755 TTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATT--ATGA-ATCCA 46811
||| ||||| || || || | | | || || || | ||| || |||| |||||
Sbjct 408673 TTCAACAGCAGCAAAAGCTATTACACGTTCACCAAAATTAGCAGAATCCGATGATATCCA 408732
Query 46812 CCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 46871
|||||||||||| ||| | || ||| ||||| ||||| || ||||| || |
Sbjct 408733 TGACAAAGCCCAATCAGCTTTTCTTTTAACAGCTGGCATAGTTTCAATGGCATTGAATAA 408792
Query 46872 AAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGA 46931
| | | || |||| |||||||| ||| || || || | || || |||||||| ||
Sbjct 408793 ATATTCACGTTGGTCACGATCTTTAATATAGGTGTCAATAAGAATGCTGTACATTTCCGA 408852
Query 46932 ATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTAC 46991
|||| || || ||||| ||||| || || || || || | |||||||| | || ||
Sbjct 408853 GTGAACATTCTCCATAGCAATCTGGAAGCCATAGAAGCAGCGGGCTTCAGTTACTTGCAC 408912
Query 46992 CTCTGTACAAAATCGTTCAGACAA-ATTCTCATTCACTATTCCATCACTAGCAGCAAAAA 47050
|||| | |||||| || ||||| ||||||||| ||||| ||||| |||||||| |
Sbjct 408913 CTCTTGAGAAAATCTCTC-GACAAGATTCTCATTAACTATGCCATCGGAGGCAGCAAAGA 408971
Query 47051 ATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGA 47110
| ||||| ||||| ||| |||||| |||||| | || ||||| | ||||||| |
Sbjct 408972 AAGCCAACACATGGGAAATGAAATATCTTTCATTGTCTGTGAGTTTCTCCCAGTCAGACA 409031
Query 47111 TATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGC 47159
||||||| || | ||| ||||| ||| | ||||| ||||| ||||| ||
Sbjct 409032 TATCTTTAGACAGATCCACTTCCTCAACAGTCCAAAATGATGCCTCAGC 409080
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712827085549440
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