Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31] 12,042 sequences; 971,188,624 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq305 223 4e-53 >seq305 Length=710094 Score = 223 bits (246), Expect = 4e-53 Identities = 466/689 (68%), Gaps = 4/689 (1%) Strand=Plus/Plus Query 23343 ATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTAC 23402 ||||||||||||||||||||| | |||| |||||| | || ||||| || | || Sbjct 408382 ATCTGCTACAAATTCAATATACTCGGACATTAAATCACAATTCATACCAATCAAATTGCA 408441 Query 23403 TGGAATCGCATCATATAAG-AATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAA 23461 ||| | || || | |||| ||| | ||| || ||| || ||| | ||||| | || Sbjct 408442 TGGCAATGCTTC-TGTAAGGAATTCCTGTTCGATTTTAACCGCTTCTCTTATTATCTCAA 408500 Query 23462 CAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAATAA-ACATGCAAAATCA 23520 ||| |||| || || | | ||||||||||| || ||| ||||||||| Sbjct 408501 TGATACGTTCTCTGCTGGGCTTCTGCACCAGATACTTAAACATCAATACA-GCAAAATCA 408559 Query 23521 CAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAAT 23580 ||||| | ||||| || | |||| || || || |||||||| || ||||||| Sbjct 408560 CAATGCAAACCTTCGTCACGCGATATCAGCTCGTTGGAGAATGTTAAGCCGGGCATTAGG 408619 Query 23581 CCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACA 23640 || ||||| || | ||| || || | ||||| ||| ||||| || || |||||| Sbjct 408620 CCACGTTTCTTCAACCAGAAAATGGAGGCAAAACTGCCGCTGAAGAATATGCCTTCAACA 408679 Query 23641 GCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAttttttt 23700 || ||||| || | | |||| |||||| | ||| || || |||||| Sbjct 408680 GCAGCAAAAGCTATTACACGTTCACCAAAATTAGCAGAATCCGATGATATCCATGACAAA 408739 Query 23701 GTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTT 23760 | ||||| ||| || ||| ||| || |||||||| || || || | | | Sbjct 408740 GCCCAATCAGCTTTTCTTTTAACAGCTGGCATAGTTTCAATGGCATTGAATAAATATTCA 408799 Query 23761 TTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATA 23820 || ||| |||| | ||||| || ||||| || | || |||||||| || |||| | Sbjct 408800 CGTTGGTCACGATCTTTAATATAGGTGTCAATAAGAATGCTGTACATTTCCGAGTGAACA 408859 Query 23821 TTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTA 23880 || || ||||||||||| || ||||| || || | ||||||| | ||| || || | | Sbjct 408860 TTCTCCATAGCAATCTGGAAGCCATAGAAGCAGCGGGCTTCAGTTACTTGCACCTCTTGA 408919 Query 23881 AAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGA 23940 ||||||| | | | ||| || ||||| || ||||| |||||||||||||| | Sbjct 408920 GAAAATCTCTCGACAAGATTCTCATTAACTATGCCATCGGAGGCAGCAAAGAAAGCCAAC 408979 Query 23941 ACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCATTAATATCTTTT 24000 |||| || |||| |||||||| || | ||| | ||| ||| |||||||| Sbjct 408980 ACATGGGAAATGAAATATCTTTCATTGTCTGTGAGTTTCTCCCAGTCAGACATATCTTTA 409039 Query 24001 GATAAATCAACTTCATCAACTGTCCAAAA 24029 || | ||| ||||| ||||| |||||||| Sbjct 409040 GACAGATCCACTTCCTCAACAGTCCAAAA 409068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521409503018800