Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31]
12,042 sequences; 971,188,624 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq305 223 4e-53
>seq305
Length=710094
Score = 223 bits (246), Expect = 4e-53
Identities = 466/689 (68%), Gaps = 4/689 (1%)
Strand=Plus/Plus
Query 23343 ATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTAC 23402
||||||||||||||||||||| | |||| |||||| | || ||||| || | ||
Sbjct 408382 ATCTGCTACAAATTCAATATACTCGGACATTAAATCACAATTCATACCAATCAAATTGCA 408441
Query 23403 TGGAATCGCATCATATAAG-AATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAA 23461
||| | || || | |||| ||| | ||| || ||| || ||| | ||||| | ||
Sbjct 408442 TGGCAATGCTTC-TGTAAGGAATTCCTGTTCGATTTTAACCGCTTCTCTTATTATCTCAA 408500
Query 23462 CAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAATAA-ACATGCAAAATCA 23520
||| |||| || || | | ||||||||||| || ||| |||||||||
Sbjct 408501 TGATACGTTCTCTGCTGGGCTTCTGCACCAGATACTTAAACATCAATACA-GCAAAATCA 408559
Query 23521 CAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAAT 23580
||||| | ||||| || | |||| || || || |||||||| || |||||||
Sbjct 408560 CAATGCAAACCTTCGTCACGCGATATCAGCTCGTTGGAGAATGTTAAGCCGGGCATTAGG 408619
Query 23581 CCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACA 23640
|| ||||| || | ||| || || | ||||| ||| ||||| || || ||||||
Sbjct 408620 CCACGTTTCTTCAACCAGAAAATGGAGGCAAAACTGCCGCTGAAGAATATGCCTTCAACA 408679
Query 23641 GCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAttttttt 23700
|| ||||| || | | |||| |||||| | ||| || || ||||||
Sbjct 408680 GCAGCAAAAGCTATTACACGTTCACCAAAATTAGCAGAATCCGATGATATCCATGACAAA 408739
Query 23701 GTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTT 23760
| ||||| ||| || ||| ||| || |||||||| || || || | | |
Sbjct 408740 GCCCAATCAGCTTTTCTTTTAACAGCTGGCATAGTTTCAATGGCATTGAATAAATATTCA 408799
Query 23761 TTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATA 23820
|| ||| |||| | ||||| || ||||| || | || |||||||| || |||| |
Sbjct 408800 CGTTGGTCACGATCTTTAATATAGGTGTCAATAAGAATGCTGTACATTTCCGAGTGAACA 408859
Query 23821 TTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTA 23880
|| || ||||||||||| || ||||| || || | ||||||| | ||| || || | |
Sbjct 408860 TTCTCCATAGCAATCTGGAAGCCATAGAAGCAGCGGGCTTCAGTTACTTGCACCTCTTGA 408919
Query 23881 AAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGA 23940
||||||| | | | ||| || ||||| || ||||| |||||||||||||| |
Sbjct 408920 GAAAATCTCTCGACAAGATTCTCATTAACTATGCCATCGGAGGCAGCAAAGAAAGCCAAC 408979
Query 23941 ACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCATTAATATCTTTT 24000
|||| || |||| |||||||| || | ||| | ||| ||| ||||||||
Sbjct 408980 ACATGGGAAATGAAATATCTTTCATTGTCTGTGAGTTTCTCCCAGTCAGACATATCTTTA 409039
Query 24001 GATAAATCAACTTCATCAACTGTCCAAAA 24029
|| | ||| ||||| ||||| ||||||||
Sbjct 409040 GACAGATCCACTTCCTCAACAGTCCAAAA 409068
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521409503018800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |