Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22] 14,739 sequences; 176,210,797 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq14242 98.7 2e-15 seq14215 98.7 2e-15 seq13985 98.7 2e-15 seq13254 96.9 7e-15 seq13834 86.0 1e-11 seq12905 86.0 1e-11 >seq14242 Length=57729 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||| Sbjct 27935 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 27876 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 27875 CCCACGTTGGGC 27864 >seq14215 Length=63435 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||| Sbjct 53065 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 53124 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 53125 CCCACGTTGGGC 53136 >seq13985 Length=15832 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||| Sbjct 12835 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 12776 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 12775 CCCACGTTGGGC 12764 Score = 95.1 bits (104), Expect = 3e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||| | ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||| Sbjct 13296 GCCTGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 13355 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 13356 CCCACGTTGGGC 13367 >seq13254 Length=200242 Score = 96.9 bits (106), Expect = 7e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||| | ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||| Sbjct 31120 TGCCTGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 31061 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 31060 CCCCACGTTGGGC 31048 >seq13834 Length=630142 Score = 86.0 bits (94), Expect = 1e-11 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 61079 TCGAATTTGTCAAGCATCAACATCTGAACTGTATGGAAAAGTTCAAGAAATTCCTCAAAC 61138 |||| ||| ||||||||| || |||| ||||||||||||| ||||||||||| || || Sbjct 6551 TCGATTTTATCAAGCATCTACGAGTGAATTGTATGGAAAAGTGCAAGAAATTCCACAGAC 6492 Query 61139 AGAAAGGACTCCGTTTTATCCTCGTAGCCCGTATGGT 61175 |||| | || ||||||| ||||| || |||||| Sbjct 6491 AGAACGAACAGCGTTTTACCCTCGGTCACCATATGGT 6455 >seq12905 Length=113012 Score = 86.0 bits (94), Expect = 1e-11 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 61079 TCGAATTTGTCAAGCATCAACATCTGAACTGTATGGAAAAGTTCAAGAAATTCCTCAAAC 61138 |||| ||| ||||||||| || |||| ||||||||||||| ||||||||||| || || Sbjct 1021 TCGATTTTATCAAGCATCTACGAGTGAATTGTATGGAAAAGTGCAAGAAATTCCACAGAC 1080 Query 61139 AGAAAGGACTCCGTTTTATCCTCGTAGCCCGTATGGT 61175 |||| | || ||||||| ||||| || |||||| Sbjct 1081 AGAACGAACAGCGTTTTACCCTCGGTCACCATATGGT 1117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057624236879570