Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22]
14,739 sequences; 176,210,797 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq7637 246 2e-60
seq13722 156 3e-33
>seq7637
Length=48035
Score = 246 bits (272), Expect = 2e-60
Identities = 503/742 (68%), Gaps = 8/742 (1%)
Strand=Plus/Plus
Query 101533 TTAAACAGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAATATAATGTC 101592
|||||||||||||| ||||||||| | || ||||| || || |||| ||||||
Sbjct 7195 TTAAACAGCCATATCCATTTTAATAACCGGATGTGGCTTGTAACCGACTAAGCGAATGTC 7254
Query 101593 ATCTGCTTTAAAGTCATCAATGCA--TGAA-ACATTTCTAGCAAATCTAAGTGTTGGAAA 101649
| | ||| ||| ||||||||| |||| || || | ||| ||| | |||||
Sbjct 7255 AGCGGCTACAAATTCATCAATGTTGTTGAATAC---TCGATCAATGAAAAGCTTCGGAAA 7311
Query 101650 CGGTCTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTG 101709
| || || || || |||||||| ||||| ||||||| |||| | || | ||
Sbjct 7312 AGATCGCGGTGTACGGCTCAACTGCTCTTTAATCGCATCAACATGATTCAAGTAAACATG 7371
Query 101710 AGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCAT 101769
|| || |||| | | || ||||| ||||||||| | |||||| || ||||| | ||
Sbjct 7372 TGCGTCGCCTAAACTGTGAATAAAGTCTCCAGGCTTCAAATTAGTCACGTGAGCCAGGAT 7431
Query 101770 GCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGA 101829
||||| | || || |||||||| ||||| || |||||||| | ||||||||||||||
Sbjct 7432 ACAAGTGAGGAGGGAGTAGCTAGCGATGTTGAAAGGCACTCCGAGTCCCATATCAGCTGA 7491
Query 101830 TCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATTGACTTAATACATG 101889
|| || ||||| || || || | | || || |||| ||||||||| ||||| ||
Sbjct 7492 TCGCTGGTACAGCTGGCACGATAATTCGCCTTCGGAGACGTAAAATTGAGCCAATACGTG 7551
Query 101890 ACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCT 101949
|||||| | | ||||||| | | |||||| ||||| | | |||| | || |
Sbjct 7552 ACAAGGACGGAGAGCCATTTTCGATAAGTCTGATGGGTTCCACGAAGACATGATGATGCC 7611
Query 101950 TCTATCTGTAGGGTTTGTTT-TTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCTT 102008
||| || | |||| || ||| || ||| || | |||| ||||| |||| |||||
Sbjct 7612 TCTGTC-GAAGGGATTATTTCGAATTAAATCGATGACATGTTCCAATTGATCAAATCCTT 7670
Query 102009 CTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATC 102068
| | |||||| | |||||||||| ||||||||||||| ||| || || |
Sbjct 7671 GTTGCGTGTAATCGGCATTTGCGCCTTTATATTTCGCTCCGAAATGCCGCCATTGGAAGC 7730
Query 102069 CATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATG 102128
| ||||| ||||| | ||| ||||| || | | || | || |||| |||
Sbjct 7731 CGTACACGGGTCCCACATCGCCTTCTGGGTTGCTGTTTAGTCCGACTTGGTCTAGGAATT 7790
Query 102129 ATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAG 102188
| ||| | ||| | | |||||||| ||| || || || || || |||| |
Sbjct 7791 CGCGAGAACTATTTCCGTTCCAAATGTTCACTCCTTTTGAATTTAATTCCTTCGTGTCTG 7850
Query 102189 TAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAG 102248
| ||| | || ||||||| || || || || ||||| | ||| || || | ||| |
Sbjct 7851 TGCTGCCTTTTATGAACCACAGCAACTCCTCCACTACACCGCGCCAGAAAACACGCTTCG 7910
Query 102249 TAGTTAAAAGTGGAAATTCATT 102270
|||| | | ||||||||||||
Sbjct 7911 TAGTGAGTAATGGAAATTCATT 7932
Score = 89.7 bits (98), Expect = 4e-13
Identities = 112/154 (73%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 101768 ATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCT 101827
|| || || | ||| ||||||| ||| ||||| || |||||||| | ||||||||||||
Sbjct 10893 ATACAGGTGAGAAGGGAATAGCCAGCGATGTTGAAAGGCACTCCGAGTCCCATATCAGCT 10834
Query 101828 GATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATTGACTTAATACA 101887
|||| || ||||| || || || | | | || |||| ||||||||| |||||
Sbjct 10833 GATCGCTGGTACAGCTGGCACGATAATTCGTCTTCGGAGACGTAAAATTGAGCCAATACG 10774
Query 101888 TGACAAGGCGGCAACACCATTTTAGGAATGTCTG 101921
|||||||| | | ||||||| | | |||||
Sbjct 10773 TGACAAGGACGGAGAGCCATTTTCGATAAGTCTG 10740
>seq13722
Length=82832
Score = 156 bits (172), Expect = 3e-33
Identities = 190/259 (73%), Gaps = 0/259 (0%)
Strand=Plus/Minus
Query 101667 TCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTAT 101726
||| |||| ||||| ||||||| |||| | || | || || || |||| ||| |
Sbjct 64128 TCACCTGCTCTTTAATCGCATCAACATGATTCAAGTAAACATGCGCGTCGCCTAAAGTGT 64069
Query 101727 GGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAAT 101786
| ||||| ||||||||| | |||||| || ||||| | || || || | || || |
Sbjct 64068 GAATAAAGTCTCCAGGCTTCAAATTAGTCACGTGAGCCAGGATACAGGTGAGGAGGGAGT 64009
Query 101787 AGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGAC 101846
||||||| ||||| || |||||||| | |||||||||||||||| || ||||| || |
Sbjct 64008 AGCTAGCGATGTTGAAAGGCACTCCGAGTCCCATATCAGCTGATCGCTGGTACAGCTGGC 63949
Query 101847 AGGAAAGCTTTCCATCACAGACATAAAATTGACTTAATACATGACAAGGCGGCAACACCA 101906
| || | | ||||| |||| ||||||||| ||||| |||||||| || | |||
Sbjct 63948 ACGATAATTCGCCATCGGAGACGTAAAATTGAGCCAATACGTGACAAGGAGGGAGAGCCA 63889
Query 101907 TTTTAGGAATGTCTGAAAC 101925
|||| | |||||||||||
Sbjct 63888 TTTTCGATATGTCTGAAAC 63870
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361186307882489
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |