Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22] 14,739 sequences; 176,210,797 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq13894 104 2e-17 >seq13894 Length=1211295 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || ||| | ||||| || || || || ||||||||| |||| ||||| | Sbjct 231716 ATGCAGATTTTCGTGAAAACTTTAACCGGAAAGACCATTACCCTCGAAGTCGAACCATCG 231657 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | ||| ||||| || |||||||| | || || ||| Sbjct 231656 GACACCATTGAGAATGTCAAGGCGAAAATCCAGGACAAAGAAGGCATCCCACCCGACCAA 231597 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||| | | || |||||||| || ||| |||||||| | ||| || |||||||||| Sbjct 231596 CAACGTTTAATTTTTGCGGGAAAGCAATTGGAAGATGGCCGAACCTTGTCCGATTACAAC 231537 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || ||||||||||| ||||| || |||| || ||||| |||| || Sbjct 231536 ATCCAGAAGGAATCGACTCTGCATTTGGTTTTGCGATTGAGAGGTGG 231490 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 |||||||| || || | ||||| || || || || ||||| || |||| || || Sbjct 232404 AAAATGCAGATTTTTGTGAAAACCTTAACCGGTAAGACCATAACTCTCGAAGTCGAGCCT 232345 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || ||| | | | | ||| ||||| |||||||||||| | || ||| Sbjct 232344 TCCGATACGATTGAAAACGTGAAGGCGAAAATCCAGGATAAAGAAGGTATCCCACCGGAT 232285 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 || ||| || | || ||||||||||| ||| |||||||| | ||| | |||| ||| Sbjct 232284 CAGCAACGATTAATTTTTGCGGGCAAGCAATTGGAAGATGGCCGAACCTTATCCGACTAC 232225 Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || || ||||||||||| || ||||| |||| || || ||| |||| || Sbjct 232224 AACATCCAGAAGGAATCGACCCTTCATCTGGTATTGCGTTTAAGAGGCGG 232175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428259057335045