Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22] 14,739 sequences; 176,210,797 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq13338 178 2e-39 >seq13338 Length=646138 Score = 178 bits (196), Expect = 2e-39 Identities = 242/338 (72%), Gaps = 0/338 (0%) Strand=Plus/Plus Query 135601 GATAAAGACGAGTGGACTACGTGGaaaaaaaTACCCGATCCTGTTTTGCATATAGAACTT 135660 || ||||| || ||| || ||||||| || || || || | ||||| ||||| Sbjct 624890 GACAAAGATGAATGGGACACCTGGAAAACTATGAAAGACCCAGTGCTACATATTGAACTA 624949 Query 135661 AGGAGATGGGCGGATGTTTTTATTATAGCGCCCTTAACGGCAAATACGTTAGCAAAAATA 135720 | |||||||| ||| | ||| |||| || || ||| || ||||||||||| ||||| Sbjct 624950 CGTAGATGGGCTGATTTATTTGTTATTGCTCCGTTAGATGCTAATACGTTAGCCAAAATG 625009 Query 135721 GCTAATGGTATATGCGATAATTTACTGACGTCTATTGTAAGAGCCTGGGATACAAACAAA 135780 |||||||| || || ||||||||| | || | | | | |||||| ||||| | || ||| Sbjct 625010 GCTAATGGAATGTGTGATAATTTAATTACTTGTGTAGCAAGAGCTTGGGACCCTAAAAAA 625069 Query 135781 CCACTCATTTTCTGTCCTGCAATGAATACTCTTATGTGGGAACATCCTATTACAGAAAAA 135840 || || ||||||| ||||| |||||||| |||||||||||||||| | |||| | Sbjct 625070 CCTCTTCTTTTCTGCCCTGCCATGAATACATTTATGTGGGAACATCCATTAACAGCAGTT 625129 Query 135841 CATATAGATACGTTAAAATATATGGGTTTCATAGAAATAGAATGCATAGaaaaaaaaCTA 135900 ||||| || | | ||| | | |||| |||| ||| | | |||||| |||| Sbjct 625130 CATATTGACAATATGAAAAAATTAGGTTATGTAGAGATACCAGTTGTTAAAAAAACACTA 625189 Query 135901 GCATGTGGAGACGTAGGAAATGGTGCTATGGCAGAAGT 135938 |||||||| || ||| ||||||| ||||| || || Sbjct 625190 GCATGTGGTGATACAGGTTATGGTGCAATGGCTGAGGT 625227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923026712529560