Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22] 14,739 sequences; 176,210,797 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq12995 87.8 2e-12 >seq12995 Length=433444 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/130 (76%), Gaps = 2/130 (2%) Strand=Plus/Minus Query 16562 TGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTT-CAGAGTAAAACCTTTCTGC 16620 ||||| |||||||| || || ||||| | |||||||||| | || | || ||||| | Sbjct 321056 TGAAACCCATAAAAACACCTCGCTTCTGGGATTTGTACTTCCTGACT-GAATCTTTCCAC 320998 Query 16621 TAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAA 16680 ||| ||||| ||||| |||||||| || || |||||||| || | || || | ||||| Sbjct 320997 TAAATTTTCATTAACAATTCCATCACTCGCCGCAAAAAAAGCCAAAATTTGACTTATAAA 320938 Query 16681 AtttttttCG 16690 |||||||| Sbjct 320937 CATTTTTTCG 320928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462426787945400