Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22]
14,739 sequences; 176,210,797 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq12995 87.8 2e-12
>seq12995
Length=433444
Score = 87.8 bits (96), Expect = 2e-12
Identities = 99/130 (76%), Gaps = 2/130 (2%)
Strand=Plus/Minus
Query 16562 TGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTT-CAGAGTAAAACCTTTCTGC 16620
||||| |||||||| || || ||||| | |||||||||| | || | || ||||| |
Sbjct 321056 TGAAACCCATAAAAACACCTCGCTTCTGGGATTTGTACTTCCTGACT-GAATCTTTCCAC 320998
Query 16621 TAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAA 16680
||| ||||| ||||| |||||||| || || |||||||| || | || || | |||||
Sbjct 320997 TAAATTTTCATTAACAATTCCATCACTCGCCGCAAAAAAAGCCAAAATTTGACTTATAAA 320938
Query 16681 AtttttttCG 16690
||||||||
Sbjct 320937 CATTTTTTCG 320928
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462426787945400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |