Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22] 14,739 sequences; 176,210,797 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq12995 82.4 7e-11 >seq12995 Length=433444 Score = 82.4 bits (90), Expect = 7e-11 Identities = 105/142 (74%), Gaps = 2/142 (1%) Strand=Plus/Minus Query 13466 TCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACTT-CGGAGTA 13524 |||||| | ||| || ||||||||||| || || |||| | || |||| | || | Sbjct 321068 TCCATCATAACTTGAAACCCATAAAAACACCTCGCTTCTGGGATTTGTACTTCCTGACT- 321010 Query 13525 AAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAAGTAT 13584 |||||||| |||| ||||| ||||| || || ||||| || ||||||||||| | || Sbjct 321009 GAATCTTTCCACTAAATTTTCATTAACAATTCCATCACTCGCCGCAAAAAAAGCCAAAAT 320950 Query 13585 GTGCTTAATAAAttttttttCG 13606 || | ||||| |||||||| Sbjct 320949 TTGACTTATAAACATTTTTTCG 320928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430904981958078