Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22]
14,739 sequences; 176,210,797 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq12159 143 3e-29
>seq12159
Length=131859
Score = 143 bits (158), Expect = 3e-29
Identities = 223/313 (71%), Gaps = 8/313 (3%)
Strand=Plus/Plus
Query 164393 ATTGGAATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCA 164452
||||| |||| | | |||||| | || || | ||| ||||||||| |||||| |
Sbjct 87153 ATTGGGATTTCAATAAGATGGGAATTGGCGGTTTGGATAAAGAATTTTCAGCTATTTTTA 87212
Query 164453 GACGAGCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAAC 164512
|||| || ||||| || ||| | ||||| ||||| | | ||||||| |||||||
Sbjct 87213 GACGTGCTTTTGCATCGAGAGTATTTCCTCCTGAAATTGTGGAGCAATTAGGTTGTAAAC 87272
Query 164513 ATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGAT 164572
|| | ||||||||| | | || || || || || |||||| | |||||||||
Sbjct 87273 ATGTTAAAGGAATTCTCCTTTTCGGGCCGCCAGGGACAGGCAAAACACTTATGGCTCGAC 87332
Query 164573 GCATTGCTCAAGCTTTTAAA---TCGCGACCCGTTAAAATTGTTAATGGTCCTGA-ATTA 164628
|| | ||| | ||||| |||||| || ||||||||||||||||||| | |||
Sbjct 87333 AGATCGG-CAAAATGTTAAACGCTCGCGAACC--TAAAATTGTTAATGGTCCTCAGATTC 87389
Query 164629 TTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAA 164688
| | |||||||||| ||||| || ||||||||||| || || ||| || || |||
Sbjct 87390 TCG-ACAAATATGTCGGTGAATCGGAAGCTAATGTACGACGCTTATTTGCTGACGCAGAA 87448
Query 164689 GAAGAACAAAAGA 164701
|| ||| ||||||
Sbjct 87449 GATGAAGAAAAGA 87461
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595762218032400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |