Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22] 14,739 sequences; 176,210,797 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq12159 143 3e-29 >seq12159 Length=131859 Score = 143 bits (158), Expect = 3e-29 Identities = 223/313 (71%), Gaps = 8/313 (3%) Strand=Plus/Plus Query 164393 ATTGGAATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCA 164452 ||||| |||| | | |||||| | || || | ||| ||||||||| |||||| | Sbjct 87153 ATTGGGATTTCAATAAGATGGGAATTGGCGGTTTGGATAAAGAATTTTCAGCTATTTTTA 87212 Query 164453 GACGAGCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAAC 164512 |||| || ||||| || ||| | ||||| ||||| | | ||||||| ||||||| Sbjct 87213 GACGTGCTTTTGCATCGAGAGTATTTCCTCCTGAAATTGTGGAGCAATTAGGTTGTAAAC 87272 Query 164513 ATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGAT 164572 || | ||||||||| | | || || || || || |||||| | ||||||||| Sbjct 87273 ATGTTAAAGGAATTCTCCTTTTCGGGCCGCCAGGGACAGGCAAAACACTTATGGCTCGAC 87332 Query 164573 GCATTGCTCAAGCTTTTAAA---TCGCGACCCGTTAAAATTGTTAATGGTCCTGA-ATTA 164628 || | ||| | ||||| |||||| || ||||||||||||||||||| | ||| Sbjct 87333 AGATCGG-CAAAATGTTAAACGCTCGCGAACC--TAAAATTGTTAATGGTCCTCAGATTC 87389 Query 164629 TTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAA 164688 | | |||||||||| ||||| || ||||||||||| || || ||| || || ||| Sbjct 87390 TCG-ACAAATATGTCGGTGAATCGGAAGCTAATGTACGACGCTTATTTGCTGACGCAGAA 87448 Query 164689 GAAGAACAAAAGA 164701 || ||| |||||| Sbjct 87449 GATGAAGAAAAGA 87461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595762218032400